Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KDELR3O43731 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
KDELR3O43731 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KDELR3O43731 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.19■□□□□ 0.34
KDELR3O43731 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KDELR3O43731 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
KDELR3O43731 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.19■□□□□ 0.34
KDELR3O43731 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
KDELR3O43731 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KDELR3O43731 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
KDELR3O43731 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
KDELR3O43731 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
KDELR3O43731 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
KDELR3O43731 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.19■□□□□ 0.34
KDELR3O43731 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.19■□□□□ 0.34
KDELR3O43731 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
KDELR3O43731 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.19■□□□□ 0.34
KDELR3O43731 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.19■□□□□ 0.34
KDELR3O43731 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.19■□□□□ 0.34
KDELR3O43731 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.19■□□□□ 0.34
KDELR3O43731 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.19■□□□□ 0.34
KDELR3O43731 PDPK2P-202ENST00000562415 1191 ntBASIC17.19■□□□□ 0.34
KDELR3O43731 AC002347.1-201ENST00000569543 541 ntBASIC17.19■□□□□ 0.34
KDELR3O43731 AC013467.2-201ENST00000605472 835 ntBASIC17.19■□□□□ 0.34
KDELR3O43731 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.19■□□□□ 0.34
KDELR3O43731 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.19■□□□□ 0.34
KDELR3O43731 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.19■□□□□ 0.34
KDELR3O43731 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.19■□□□□ 0.34
KDELR3O43731 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.19■□□□□ 0.34
KDELR3O43731 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KDELR3O43731 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
KDELR3O43731 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.19■□□□□ 0.34
KDELR3O43731 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
KDELR3O43731 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
KDELR3O43731 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KDELR3O43731 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KDELR3O43731 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
KDELR3O43731 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
KDELR3O43731 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
KDELR3O43731 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KDELR3O43731 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.19■□□□□ 0.34
KDELR3O43731 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
KDELR3O43731 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KDELR3O43731 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KDELR3O43731 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KDELR3O43731 AC006277.1-201ENST00000624348 1610 ntBASIC17.18■□□□□ 0.34
KDELR3O43731 LINC00895-201ENST00000629028 1637 ntBASIC17.18■□□□□ 0.34
KDELR3O43731 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.18■□□□□ 0.34
KDELR3O43731 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KDELR3O43731 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KDELR3O43731 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
KDELR3O43731 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KDELR3O43731 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
KDELR3O43731 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KDELR3O43731 HMGA1P7-201ENST00000406908 502 ntBASIC17.18■□□□□ 0.34
KDELR3O43731 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.18■□□□□ 0.34
KDELR3O43731 AC004832.2-201ENST00000426397 482 ntBASIC17.18■□□□□ 0.34
KDELR3O43731 AC074386.1-202ENST00000463561 864 ntBASIC17.18■□□□□ 0.34
KDELR3O43731 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
KDELR3O43731 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.18■□□□□ 0.34
KDELR3O43731 AC087641.1-201ENST00000557561 1021 ntBASIC17.18■□□□□ 0.34
KDELR3O43731 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.18■□□□□ 0.34
KDELR3O43731 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.18■□□□□ 0.34
KDELR3O43731 AP001350.2-201ENST00000625104 1094 ntBASIC17.18■□□□□ 0.34
KDELR3O43731 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KDELR3O43731 AC105020.1-201ENST00000435356 2205 ntBASIC17.18■□□□□ 0.34
KDELR3O43731 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KDELR3O43731 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KDELR3O43731 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
KDELR3O43731 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KDELR3O43731 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
KDELR3O43731 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
KDELR3O43731 AC080080.1-201ENST00000625121 2420 ntBASIC17.18■□□□□ 0.34
KDELR3O43731 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
KDELR3O43731 AC005915.1-201ENST00000624912 2018 ntBASIC17.18■□□□□ 0.34
KDELR3O43731 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
KDELR3O43731 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
KDELR3O43731 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
KDELR3O43731 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
KDELR3O43731 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
KDELR3O43731 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
KDELR3O43731 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
KDELR3O43731 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
KDELR3O43731 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
KDELR3O43731 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
KDELR3O43731 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.17■□□□□ 0.34
KDELR3O43731 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.17■□□□□ 0.34
KDELR3O43731 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.17■□□□□ 0.34
KDELR3O43731 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.17■□□□□ 0.34
KDELR3O43731 MCCD1P2-201ENST00000423228 335 ntBASIC17.17■□□□□ 0.34
KDELR3O43731 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
KDELR3O43731 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.17■□□□□ 0.34
KDELR3O43731 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
KDELR3O43731 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
KDELR3O43731 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.17■□□□□ 0.34
KDELR3O43731 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.17■□□□□ 0.34
KDELR3O43731 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.17■□□□□ 0.34
KDELR3O43731 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.17■□□□□ 0.34
KDELR3O43731 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
KDELR3O43731 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms