Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
RNF13O43567 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF13O43567 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF13O43567 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF13O43567 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF13O43567 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF13O43567 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF13O43567 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF13O43567 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF13O43567 PMPCAP1-201ENST00000508114 1576 ntBASIC15.53■□□□□ 0.08
RNF13O43567 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RNF13O43567 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF13O43567 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
RNF13O43567 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF13O43567 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
RNF13O43567 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF13O43567 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
RNF13O43567 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF13O43567 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF13O43567 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF13O43567 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF13O43567 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF13O43567 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF13O43567 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF13O43567 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF13O43567 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF13O43567 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RNF13O43567 SLC25A1P3-201ENST00000395415 828 ntBASIC15.53■□□□□ 0.08
RNF13O43567 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.53■□□□□ 0.08
RNF13O43567 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.53■□□□□ 0.08
RNF13O43567 MIR5100-201ENST00000579544 119 ntBASIC15.53■□□□□ 0.08
RNF13O43567 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF13O43567 AL591684.3-201ENST00000605187 298 ntBASIC15.53■□□□□ 0.08
RNF13O43567 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.53■□□□□ 0.08
RNF13O43567 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF13O43567 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF13O43567 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RNF13O43567 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF13O43567 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.53■□□□□ 0.08
RNF13O43567 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF13O43567 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RNF13O43567 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.53■□□□□ 0.08
RNF13O43567 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.53■□□□□ 0.08
RNF13O43567 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF13O43567 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF13O43567 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF13O43567 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RNF13O43567 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF13O43567 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
RNF13O43567 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF13O43567 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
RNF13O43567 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF13O43567 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF13O43567 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF13O43567 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF13O43567 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
RNF13O43567 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF13O43567 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF13O43567 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF13O43567 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF13O43567 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF13O43567 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
RNF13O43567 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF13O43567 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RNF13O43567 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
RNF13O43567 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RNF13O43567 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
RNF13O43567 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.08
RNF13O43567 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RNF13O43567 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF13O43567 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF13O43567 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF13O43567 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.52■□□□□ 0.08
RNF13O43567 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF13O43567 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF13O43567 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.52■□□□□ 0.08
RNF13O43567 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.52■□□□□ 0.08
RNF13O43567 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
RNF13O43567 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF13O43567 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.52■□□□□ 0.08
RNF13O43567 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
RNF13O43567 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.52■□□□□ 0.08
RNF13O43567 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF13O43567 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.52■□□□□ 0.08
RNF13O43567 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RNF13O43567 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF13O43567 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
RNF13O43567 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.52■□□□□ 0.08
RNF13O43567 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.52■□□□□ 0.08
RNF13O43567 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RNF13O43567 AL020989.1-201ENST00000422979 469 ntBASIC15.52■□□□□ 0.08
RNF13O43567 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF13O43567 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
RNF13O43567 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.52■□□□□ 0.08
RNF13O43567 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RNF13O43567 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC15.52■□□□□ 0.08
RNF13O43567 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RNF13O43567 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.52■□□□□ 0.08
RNF13O43567 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.52■□□□□ 0.08
RNF13O43567 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms