Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SMAD6O43541 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SMAD6O43541 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SMAD6O43541 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMAD6O43541 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMAD6O43541 AC131009.4-201ENST00000624048 1740 ntBASIC17.11■□□□□ 0.33
SMAD6O43541 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMAD6O43541 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.11■□□□□ 0.33
SMAD6O43541 AC211486.1-202ENST00000416371 468 ntBASIC17.11■□□□□ 0.33
SMAD6O43541 RPS8P6-201ENST00000426177 609 ntBASIC17.11■□□□□ 0.33
SMAD6O43541 MKNK2P1-201ENST00000437526 628 ntBASIC17.11■□□□□ 0.33
SMAD6O43541 AC004967.1-201ENST00000453589 447 ntBASIC17.11■□□□□ 0.33
SMAD6O43541 AC211476.1-201ENST00000503899 468 ntBASIC17.11■□□□□ 0.33
SMAD6O43541 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.11■□□□□ 0.33
SMAD6O43541 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.11■□□□□ 0.33
SMAD6O43541 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SMAD6O43541 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMAD6O43541 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SMAD6O43541 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMAD6O43541 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMAD6O43541 ELL2P1-201ENST00000413990 1906 ntBASIC17.11■□□□□ 0.33
SMAD6O43541 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMAD6O43541 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMAD6O43541 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SMAD6O43541 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.11■□□□□ 0.33
SMAD6O43541 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SMAD6O43541 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SMAD6O43541 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMAD6O43541 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.1■□□□□ 0.33
SMAD6O43541 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMAD6O43541 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMAD6O43541 AL121761.2-201ENST00000598007 1648 ntBASIC17.1■□□□□ 0.33
SMAD6O43541 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMAD6O43541 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMAD6O43541 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMAD6O43541 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SMAD6O43541 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SMAD6O43541 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMAD6O43541 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SMAD6O43541 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMAD6O43541 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.1■□□□□ 0.33
SMAD6O43541 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMAD6O43541 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMAD6O43541 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMAD6O43541 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMAD6O43541 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
SMAD6O43541 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SMAD6O43541 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMAD6O43541 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
SMAD6O43541 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.1■□□□□ 0.33
SMAD6O43541 AC140658.5-201ENST00000438532 169 ntBASIC17.1■□□□□ 0.33
SMAD6O43541 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.1■□□□□ 0.33
SMAD6O43541 CEND1P1-201ENST00000451006 455 ntBASIC17.1■□□□□ 0.33
SMAD6O43541 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SMAD6O43541 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.1■□□□□ 0.33
SMAD6O43541 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.1■□□□□ 0.33
SMAD6O43541 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.1■□□□□ 0.33
SMAD6O43541 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.1■□□□□ 0.33
SMAD6O43541 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
SMAD6O43541 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.1■□□□□ 0.33
SMAD6O43541 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.1■□□□□ 0.33
SMAD6O43541 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
SMAD6O43541 MIR4492-201ENST00000581627 80 ntBASIC17.1■□□□□ 0.33
SMAD6O43541 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMAD6O43541 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.1■□□□□ 0.33
SMAD6O43541 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.1■□□□□ 0.33
SMAD6O43541 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMAD6O43541 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMAD6O43541 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
SMAD6O43541 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SMAD6O43541 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMAD6O43541 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.1■□□□□ 0.33
SMAD6O43541 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMAD6O43541 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SMAD6O43541 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMAD6O43541 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.1■□□□□ 0.33
SMAD6O43541 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SMAD6O43541 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMAD6O43541 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMAD6O43541 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMAD6O43541 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMAD6O43541 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMAD6O43541 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SMAD6O43541 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMAD6O43541 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SMAD6O43541 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMAD6O43541 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SMAD6O43541 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMAD6O43541 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
SMAD6O43541 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.09■□□□□ 0.33
SMAD6O43541 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.09■□□□□ 0.33
SMAD6O43541 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.09■□□□□ 0.33
SMAD6O43541 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.09■□□□□ 0.33
SMAD6O43541 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.09■□□□□ 0.33
SMAD6O43541 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.09■□□□□ 0.33
SMAD6O43541 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SMAD6O43541 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.09■□□□□ 0.33
SMAD6O43541 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMAD6O43541 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMAD6O43541 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms