Protein–RNA interactions for Protein: O00458

IFRD1, Interferon-related developmental regulator 1, humanhuman

Predicted RBP Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1O00458 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
IFRD1O00458 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.83■□□□□ 0.28
IFRD1O00458 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.83■□□□□ 0.28
IFRD1O00458 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.83■□□□□ 0.28
IFRD1O00458 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
IFRD1O00458 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
IFRD1O00458 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.82■□□□□ 0.28
IFRD1O00458 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
IFRD1O00458 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
IFRD1O00458 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
IFRD1O00458 AP002414.3-201ENST00000589352 1468 ntBASIC16.82■□□□□ 0.28
IFRD1O00458 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
IFRD1O00458 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IFRD1O00458 AL590627.1-203ENST00000421194 1026 ntBASIC16.82■□□□□ 0.28
IFRD1O00458 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.82■□□□□ 0.28
IFRD1O00458 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.82■□□□□ 0.28
IFRD1O00458 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.82■□□□□ 0.28
IFRD1O00458 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.82■□□□□ 0.28
IFRD1O00458 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IFRD1O00458 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.82■□□□□ 0.28
IFRD1O00458 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.82■□□□□ 0.28
IFRD1O00458 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
IFRD1O00458 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
IFRD1O00458 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
IFRD1O00458 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IFRD1O00458 NFIC-211ENST00000641145 8399 ntBASIC16.82■□□□□ 0.28
IFRD1O00458 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.82■□□□□ 0.28
IFRD1O00458 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IFRD1O00458 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
IFRD1O00458 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.82■□□□□ 0.28
IFRD1O00458 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
IFRD1O00458 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
IFRD1O00458 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
IFRD1O00458 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
IFRD1O00458 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
IFRD1O00458 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
IFRD1O00458 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
IFRD1O00458 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.82■□□□□ 0.28
IFRD1O00458 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IFRD1O00458 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.81■□□□□ 0.28
IFRD1O00458 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
IFRD1O00458 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.81■□□□□ 0.28
IFRD1O00458 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
IFRD1O00458 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.81■□□□□ 0.28
IFRD1O00458 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.81■□□□□ 0.28
IFRD1O00458 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
IFRD1O00458 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.81■□□□□ 0.28
IFRD1O00458 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
IFRD1O00458 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
IFRD1O00458 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
IFRD1O00458 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
IFRD1O00458 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
IFRD1O00458 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
IFRD1O00458 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
IFRD1O00458 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.81■□□□□ 0.28
IFRD1O00458 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
IFRD1O00458 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.81■□□□□ 0.28
IFRD1O00458 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
IFRD1O00458 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.81■□□□□ 0.28
IFRD1O00458 AC073621.1-201ENST00000392730 636 ntBASIC16.81■□□□□ 0.28
IFRD1O00458 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
IFRD1O00458 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.81■□□□□ 0.28
IFRD1O00458 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.81■□□□□ 0.28
IFRD1O00458 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.81■□□□□ 0.28
IFRD1O00458 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
IFRD1O00458 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.81■□□□□ 0.28
IFRD1O00458 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.81■□□□□ 0.28
IFRD1O00458 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
IFRD1O00458 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
IFRD1O00458 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.81■□□□□ 0.28
IFRD1O00458 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.81■□□□□ 0.28
IFRD1O00458 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
IFRD1O00458 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
IFRD1O00458 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
IFRD1O00458 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IFRD1O00458 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IFRD1O00458 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IFRD1O00458 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IFRD1O00458 AC243591.1-201ENST00000452967 1364 ntBASIC16.8■□□□□ 0.28
IFRD1O00458 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.8■□□□□ 0.28
IFRD1O00458 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IFRD1O00458 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
IFRD1O00458 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
IFRD1O00458 AL590787.1-201ENST00000568856 1315 ntBASIC16.8■□□□□ 0.28
IFRD1O00458 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IFRD1O00458 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
IFRD1O00458 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
IFRD1O00458 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.8■□□□□ 0.28
IFRD1O00458 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.8■□□□□ 0.28
IFRD1O00458 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.8■□□□□ 0.28
IFRD1O00458 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
IFRD1O00458 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.8■□□□□ 0.28
IFRD1O00458 AC098831.1-202ENST00000438821 336 ntBASIC16.8■□□□□ 0.28
IFRD1O00458 RPS15P9-201ENST00000494093 319 ntBASIC16.8■□□□□ 0.28
IFRD1O00458 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.8■□□□□ 0.28
IFRD1O00458 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.8■□□□□ 0.28
IFRD1O00458 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.8■□□□□ 0.28
IFRD1O00458 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.8■□□□□ 0.28
IFRD1O00458 AC120114.3-201ENST00000611923 658 ntBASIC16.8■□□□□ 0.28
IFRD1O00458 BX640515.1-201ENST00000617215 977 ntBASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms