Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM49D1C9J1S8 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM49D1C9J1S8 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM49D1C9J1S8 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM49D1C9J1S8 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.07■□□□□ 0.32
TRIM49D1C9J1S8 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.07■□□□□ 0.32
TRIM49D1C9J1S8 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM49D1C9J1S8 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM49D1C9J1S8 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.07■□□□□ 0.32
TRIM49D1C9J1S8 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM49D1C9J1S8 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM49D1C9J1S8 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM49D1C9J1S8 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM49D1C9J1S8 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
TRIM49D1C9J1S8 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
TRIM49D1C9J1S8 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM49D1C9J1S8 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM49D1C9J1S8 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM49D1C9J1S8 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM49D1C9J1S8 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM49D1C9J1S8 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM49D1C9J1S8 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM49D1C9J1S8 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM49D1C9J1S8 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.07■□□□□ 0.32
TRIM49D1C9J1S8 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM49D1C9J1S8 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.07■□□□□ 0.32
TRIM49D1C9J1S8 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM49D1C9J1S8 AC022616.7-201ENST00000525383 220 ntBASIC17.07■□□□□ 0.32
TRIM49D1C9J1S8 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM49D1C9J1S8 KRT8P26-201ENST00000534154 1276 ntBASIC17.07■□□□□ 0.32
TRIM49D1C9J1S8 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.07■□□□□ 0.32
TRIM49D1C9J1S8 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.07■□□□□ 0.32
TRIM49D1C9J1S8 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM49D1C9J1S8 AC011467.2-201ENST00000598425 242 ntBASIC17.07■□□□□ 0.32
TRIM49D1C9J1S8 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM49D1C9J1S8 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.07■□□□□ 0.32
TRIM49D1C9J1S8 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.07■□□□□ 0.32
TRIM49D1C9J1S8 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM49D1C9J1S8 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TRIM49D1C9J1S8 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM49D1C9J1S8 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM49D1C9J1S8 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM49D1C9J1S8 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM49D1C9J1S8 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TRIM49D1C9J1S8 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM49D1C9J1S8 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM49D1C9J1S8 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM49D1C9J1S8 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.07■□□□□ 0.32
TRIM49D1C9J1S8 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM49D1C9J1S8 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
TRIM49D1C9J1S8 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TRIM49D1C9J1S8 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM49D1C9J1S8 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRIM49D1C9J1S8 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.06■□□□□ 0.32
TRIM49D1C9J1S8 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM49D1C9J1S8 AC007950.2-201ENST00000615045 2347 ntBASIC17.06■□□□□ 0.32
TRIM49D1C9J1S8 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM49D1C9J1S8 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM49D1C9J1S8 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM49D1C9J1S8 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
TRIM49D1C9J1S8 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.06■□□□□ 0.32
TRIM49D1C9J1S8 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.06■□□□□ 0.32
TRIM49D1C9J1S8 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM49D1C9J1S8 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM49D1C9J1S8 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.06■□□□□ 0.32
TRIM49D1C9J1S8 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
TRIM49D1C9J1S8 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.06■□□□□ 0.32
TRIM49D1C9J1S8 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.06■□□□□ 0.32
TRIM49D1C9J1S8 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM49D1C9J1S8 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM49D1C9J1S8 AC132872.4-202ENST00000622924 2756 ntBASIC17.06■□□□□ 0.32
TRIM49D1C9J1S8 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM49D1C9J1S8 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRIM49D1C9J1S8 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM49D1C9J1S8 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM49D1C9J1S8 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM49D1C9J1S8 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM49D1C9J1S8 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM49D1C9J1S8 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
TRIM49D1C9J1S8 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
TRIM49D1C9J1S8 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM49D1C9J1S8 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM49D1C9J1S8 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TRIM49D1C9J1S8 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM49D1C9J1S8 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM49D1C9J1S8 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.06■□□□□ 0.32
TRIM49D1C9J1S8 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TRIM49D1C9J1S8 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM49D1C9J1S8 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM49D1C9J1S8 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM49D1C9J1S8 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM49D1C9J1S8 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM49D1C9J1S8 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM49D1C9J1S8 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM49D1C9J1S8 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TRIM49D1C9J1S8 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM49D1C9J1S8 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM49D1C9J1S8 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM49D1C9J1S8 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
TRIM49D1C9J1S8 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms