Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV5-4A0A0C4DH59 HLA-A-202ENST00000376806 1854 ntBASIC16.68■□□□□ 0.26
TRBV5-4A0A0C4DH59 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV5-4A0A0C4DH59 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.68■□□□□ 0.26
TRBV5-4A0A0C4DH59 AC087641.1-201ENST00000557561 1021 ntBASIC16.68■□□□□ 0.26
TRBV5-4A0A0C4DH59 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.68■□□□□ 0.26
TRBV5-4A0A0C4DH59 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.68■□□□□ 0.26
TRBV5-4A0A0C4DH59 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.68■□□□□ 0.26
TRBV5-4A0A0C4DH59 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.68■□□□□ 0.26
TRBV5-4A0A0C4DH59 AC010507.1-201ENST00000633895 436 ntBASIC16.68■□□□□ 0.26
TRBV5-4A0A0C4DH59 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.68■□□□□ 0.26
TRBV5-4A0A0C4DH59 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV5-4A0A0C4DH59 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV5-4A0A0C4DH59 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.68■□□□□ 0.26
TRBV5-4A0A0C4DH59 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV5-4A0A0C4DH59 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
TRBV5-4A0A0C4DH59 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV5-4A0A0C4DH59 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV5-4A0A0C4DH59 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TRBV5-4A0A0C4DH59 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV5-4A0A0C4DH59 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV5-4A0A0C4DH59 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV5-4A0A0C4DH59 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV5-4A0A0C4DH59 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
TRBV5-4A0A0C4DH59 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
TRBV5-4A0A0C4DH59 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV5-4A0A0C4DH59 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV5-4A0A0C4DH59 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV5-4A0A0C4DH59 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.67■□□□□ 0.26
TRBV5-4A0A0C4DH59 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.67■□□□□ 0.26
TRBV5-4A0A0C4DH59 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV5-4A0A0C4DH59 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.67■□□□□ 0.26
TRBV5-4A0A0C4DH59 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV5-4A0A0C4DH59 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV5-4A0A0C4DH59 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV5-4A0A0C4DH59 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TRBV5-4A0A0C4DH59 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
TRBV5-4A0A0C4DH59 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.67■□□□□ 0.26
TRBV5-4A0A0C4DH59 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV5-4A0A0C4DH59 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.67■□□□□ 0.26
TRBV5-4A0A0C4DH59 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.67■□□□□ 0.26
TRBV5-4A0A0C4DH59 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.67■□□□□ 0.26
TRBV5-4A0A0C4DH59 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.67■□□□□ 0.26
TRBV5-4A0A0C4DH59 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.67■□□□□ 0.26
TRBV5-4A0A0C4DH59 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV5-4A0A0C4DH59 MIR4515-201ENST00000584082 81 ntBASIC16.67■□□□□ 0.26
TRBV5-4A0A0C4DH59 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV5-4A0A0C4DH59 AC064836.3-201ENST00000607928 673 ntBASIC16.67■□□□□ 0.26
TRBV5-4A0A0C4DH59 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV5-4A0A0C4DH59 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.67■□□□□ 0.26
TRBV5-4A0A0C4DH59 AC006538.1-201ENST00000567905 1585 ntBASIC16.67■□□□□ 0.26
TRBV5-4A0A0C4DH59 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV5-4A0A0C4DH59 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV5-4A0A0C4DH59 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.67■□□□□ 0.26
TRBV5-4A0A0C4DH59 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV5-4A0A0C4DH59 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TRBV5-4A0A0C4DH59 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV5-4A0A0C4DH59 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV5-4A0A0C4DH59 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
TRBV5-4A0A0C4DH59 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV5-4A0A0C4DH59 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV5-4A0A0C4DH59 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TRBV5-4A0A0C4DH59 ZNF259P1-201ENST00000407656 1365 ntBASIC16.66■□□□□ 0.26
TRBV5-4A0A0C4DH59 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.66■□□□□ 0.26
TRBV5-4A0A0C4DH59 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV5-4A0A0C4DH59 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV5-4A0A0C4DH59 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV5-4A0A0C4DH59 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
TRBV5-4A0A0C4DH59 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV5-4A0A0C4DH59 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV5-4A0A0C4DH59 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV5-4A0A0C4DH59 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
TRBV5-4A0A0C4DH59 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.66■□□□□ 0.26
TRBV5-4A0A0C4DH59 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.66■□□□□ 0.26
TRBV5-4A0A0C4DH59 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.66■□□□□ 0.26
TRBV5-4A0A0C4DH59 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.66■□□□□ 0.26
TRBV5-4A0A0C4DH59 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
TRBV5-4A0A0C4DH59 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.66■□□□□ 0.26
TRBV5-4A0A0C4DH59 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.66■□□□□ 0.26
TRBV5-4A0A0C4DH59 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.66■□□□□ 0.26
TRBV5-4A0A0C4DH59 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.66■□□□□ 0.26
TRBV5-4A0A0C4DH59 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.66■□□□□ 0.26
TRBV5-4A0A0C4DH59 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.66■□□□□ 0.26
TRBV5-4A0A0C4DH59 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV5-4A0A0C4DH59 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TRBV5-4A0A0C4DH59 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV5-4A0A0C4DH59 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV5-4A0A0C4DH59 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV5-4A0A0C4DH59 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV5-4A0A0C4DH59 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV5-4A0A0C4DH59 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV5-4A0A0C4DH59 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.66■□□□□ 0.26
TRBV5-4A0A0C4DH59 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV5-4A0A0C4DH59 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV5-4A0A0C4DH59 AC090340.1-201ENST00000620778 4980 ntBASIC16.66■□□□□ 0.26
TRBV5-4A0A0C4DH59 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV5-4A0A0C4DH59 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
TRBV5-4A0A0C4DH59 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV5-4A0A0C4DH59 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV5-4A0A0C4DH59 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms