Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
LOC102724428A0A0B4J2F2 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
LOC102724428A0A0B4J2F2 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
LOC102724428A0A0B4J2F2 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LOC102724428A0A0B4J2F2 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
LOC102724428A0A0B4J2F2 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC21.39■■□□□ 1.01
LOC102724428A0A0B4J2F2 BANF1P1-201ENST00000553684 263 ntBASIC21.39■■□□□ 1.01
LOC102724428A0A0B4J2F2 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC21.39■■□□□ 1.01
LOC102724428A0A0B4J2F2 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
LOC102724428A0A0B4J2F2 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.39■■□□□ 1.01
LOC102724428A0A0B4J2F2 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
LOC102724428A0A0B4J2F2 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
LOC102724428A0A0B4J2F2 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC21.39■■□□□ 1.01
LOC102724428A0A0B4J2F2 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
LOC102724428A0A0B4J2F2 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
LOC102724428A0A0B4J2F2 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
LOC102724428A0A0B4J2F2 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
LOC102724428A0A0B4J2F2 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC21.39■■□□□ 1.01
LOC102724428A0A0B4J2F2 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LOC102724428A0A0B4J2F2 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LOC102724428A0A0B4J2F2 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC21.38■■□□□ 1.01
LOC102724428A0A0B4J2F2 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
LOC102724428A0A0B4J2F2 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LOC102724428A0A0B4J2F2 GPR53P-205ENST00000457298 1084 ntBASIC21.38■■□□□ 1.01
LOC102724428A0A0B4J2F2 IGHV3-71-201ENST00000523324 359 ntBASIC21.38■■□□□ 1.01
LOC102724428A0A0B4J2F2 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC21.38■■□□□ 1.01
LOC102724428A0A0B4J2F2 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC21.38■■□□□ 1.01
LOC102724428A0A0B4J2F2 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LOC102724428A0A0B4J2F2 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
LOC102724428A0A0B4J2F2 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC21.38■■□□□ 1.01
LOC102724428A0A0B4J2F2 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
LOC102724428A0A0B4J2F2 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
LOC102724428A0A0B4J2F2 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LOC102724428A0A0B4J2F2 AC087289.5-201ENST00000586076 3175 ntBASIC21.38■■□□□ 1.01
LOC102724428A0A0B4J2F2 AC016396.2-201ENST00000562575 1417 ntBASIC21.38■■□□□ 1.01
LOC102724428A0A0B4J2F2 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.38■■□□□ 1.01
LOC102724428A0A0B4J2F2 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LOC102724428A0A0B4J2F2 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LOC102724428A0A0B4J2F2 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC21.37■■□□□ 1.01
LOC102724428A0A0B4J2F2 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC21.37■■□□□ 1.01
LOC102724428A0A0B4J2F2 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
LOC102724428A0A0B4J2F2 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LOC102724428A0A0B4J2F2 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
LOC102724428A0A0B4J2F2 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LOC102724428A0A0B4J2F2 AC098614.1-201ENST00000368528 745 ntBASIC21.37■■□□□ 1.01
LOC102724428A0A0B4J2F2 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
LOC102724428A0A0B4J2F2 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC21.37■■□□□ 1.01
LOC102724428A0A0B4J2F2 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC21.37■■□□□ 1.01
LOC102724428A0A0B4J2F2 AC010336.2-201ENST00000564226 506 ntBASIC21.37■■□□□ 1.01
LOC102724428A0A0B4J2F2 SPTSSB-204ENST00000617024 1292 ntBASIC21.37■■□□□ 1.01
LOC102724428A0A0B4J2F2 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC21.37■■□□□ 1.01
LOC102724428A0A0B4J2F2 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
LOC102724428A0A0B4J2F2 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC21.37■■□□□ 1.01
LOC102724428A0A0B4J2F2 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
LOC102724428A0A0B4J2F2 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC21.37■■□□□ 1.01
LOC102724428A0A0B4J2F2 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC21.37■■□□□ 1.01
LOC102724428A0A0B4J2F2 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC21.36■■□□□ 1.01
LOC102724428A0A0B4J2F2 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LOC102724428A0A0B4J2F2 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LOC102724428A0A0B4J2F2 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LOC102724428A0A0B4J2F2 AC073439.1-201ENST00000624121 1774 ntBASIC21.36■■□□□ 1.01
LOC102724428A0A0B4J2F2 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LOC102724428A0A0B4J2F2 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LOC102724428A0A0B4J2F2 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
LOC102724428A0A0B4J2F2 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
LOC102724428A0A0B4J2F2 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LOC102724428A0A0B4J2F2 PGF-202ENST00000405431 666 ntTSL 5 BASIC21.36■■□□□ 1.01
LOC102724428A0A0B4J2F2 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
LOC102724428A0A0B4J2F2 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC21.36■■□□□ 1.01
LOC102724428A0A0B4J2F2 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LOC102724428A0A0B4J2F2 GNAQP1-201ENST00000444815 1067 ntBASIC21.36■■□□□ 1.01
LOC102724428A0A0B4J2F2 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LOC102724428A0A0B4J2F2 HILS1-202ENST00000545329 423 ntBASIC21.36■■□□□ 1.01
LOC102724428A0A0B4J2F2 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC21.36■■□□□ 1.01
LOC102724428A0A0B4J2F2 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LOC102724428A0A0B4J2F2 AL133215.2-201ENST00000609242 977 ntBASIC21.36■■□□□ 1.01
LOC102724428A0A0B4J2F2 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LOC102724428A0A0B4J2F2 IGHV3-72-202ENST00000621503 303 ntBASIC21.36■■□□□ 1.01
LOC102724428A0A0B4J2F2 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC21.36■■□□□ 1.01
LOC102724428A0A0B4J2F2 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LOC102724428A0A0B4J2F2 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LOC102724428A0A0B4J2F2 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
LOC102724428A0A0B4J2F2 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC21.36■■□□□ 1.01
LOC102724428A0A0B4J2F2 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LOC102724428A0A0B4J2F2 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
LOC102724428A0A0B4J2F2 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LOC102724428A0A0B4J2F2 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
LOC102724428A0A0B4J2F2 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LOC102724428A0A0B4J2F2 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
LOC102724428A0A0B4J2F2 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
LOC102724428A0A0B4J2F2 CENPM-206ENST00000407253 818 ntTSL 2 BASIC21.35■■□□□ 1.01
LOC102724428A0A0B4J2F2 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC21.35■■□□□ 1.01
LOC102724428A0A0B4J2F2 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC21.35■■□□□ 1.01
LOC102724428A0A0B4J2F2 GIMAP3P-201ENST00000495150 836 ntBASIC21.35■■□□□ 1.01
LOC102724428A0A0B4J2F2 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC21.35■■□□□ 1.01
LOC102724428A0A0B4J2F2 AC105021.1-202ENST00000570572 669 ntBASIC21.35■■□□□ 1.01
LOC102724428A0A0B4J2F2 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC21.35■■□□□ 1.01
LOC102724428A0A0B4J2F2 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC21.35■■□□□ 1.01
LOC102724428A0A0B4J2F2 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC21.35■■□□□ 1.01
LOC102724428A0A0B4J2F2 IFT20-216ENST00000588477 774 ntTSL 5 BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms