Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV5-3A0A0A0MS03 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.92■□□□□ 0.14
TRBV5-3A0A0A0MS03 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV5-3A0A0A0MS03 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.91■□□□□ 0.14
TRBV5-3A0A0A0MS03 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV5-3A0A0A0MS03 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV5-3A0A0A0MS03 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.91■□□□□ 0.14
TRBV5-3A0A0A0MS03 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TRBV5-3A0A0A0MS03 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV5-3A0A0A0MS03 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV5-3A0A0A0MS03 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV5-3A0A0A0MS03 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV5-3A0A0A0MS03 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV5-3A0A0A0MS03 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV5-3A0A0A0MS03 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV5-3A0A0A0MS03 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TRBV5-3A0A0A0MS03 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.91■□□□□ 0.14
TRBV5-3A0A0A0MS03 PRYP5-201ENST00000451909 266 ntBASIC15.91■□□□□ 0.14
TRBV5-3A0A0A0MS03 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.91■□□□□ 0.14
TRBV5-3A0A0A0MS03 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
TRBV5-3A0A0A0MS03 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV5-3A0A0A0MS03 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV5-3A0A0A0MS03 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC15.91■□□□□ 0.14
TRBV5-3A0A0A0MS03 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.91■□□□□ 0.14
TRBV5-3A0A0A0MS03 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.91■□□□□ 0.14
TRBV5-3A0A0A0MS03 AC074051.2-201ENST00000565115 352 ntBASIC15.91■□□□□ 0.14
TRBV5-3A0A0A0MS03 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.91■□□□□ 0.14
TRBV5-3A0A0A0MS03 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.91■□□□□ 0.14
TRBV5-3A0A0A0MS03 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV5-3A0A0A0MS03 AC010331.1-201ENST00000611423 582 ntBASIC15.91■□□□□ 0.14
TRBV5-3A0A0A0MS03 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.91■□□□□ 0.14
TRBV5-3A0A0A0MS03 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.91■□□□□ 0.14
TRBV5-3A0A0A0MS03 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV5-3A0A0A0MS03 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV5-3A0A0A0MS03 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.91■□□□□ 0.14
TRBV5-3A0A0A0MS03 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV5-3A0A0A0MS03 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
TRBV5-3A0A0A0MS03 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.91■□□□□ 0.14
TRBV5-3A0A0A0MS03 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV5-3A0A0A0MS03 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
TRBV5-3A0A0A0MS03 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.91■□□□□ 0.14
TRBV5-3A0A0A0MS03 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.91■□□□□ 0.14
TRBV5-3A0A0A0MS03 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.91■□□□□ 0.14
TRBV5-3A0A0A0MS03 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV5-3A0A0A0MS03 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV5-3A0A0A0MS03 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV5-3A0A0A0MS03 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV5-3A0A0A0MS03 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.9■□□□□ 0.14
TRBV5-3A0A0A0MS03 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TRBV5-3A0A0A0MS03 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV5-3A0A0A0MS03 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.9■□□□□ 0.14
TRBV5-3A0A0A0MS03 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TRBV5-3A0A0A0MS03 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV5-3A0A0A0MS03 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
TRBV5-3A0A0A0MS03 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TRBV5-3A0A0A0MS03 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TRBV5-3A0A0A0MS03 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.9■□□□□ 0.14
TRBV5-3A0A0A0MS03 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.9■□□□□ 0.14
TRBV5-3A0A0A0MS03 AC105917.1-201ENST00000506637 2539 ntBASIC15.9■□□□□ 0.14
TRBV5-3A0A0A0MS03 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.9■□□□□ 0.14
TRBV5-3A0A0A0MS03 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV5-3A0A0A0MS03 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV5-3A0A0A0MS03 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV5-3A0A0A0MS03 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV5-3A0A0A0MS03 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV5-3A0A0A0MS03 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.9■□□□□ 0.14
TRBV5-3A0A0A0MS03 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV5-3A0A0A0MS03 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.9■□□□□ 0.14
TRBV5-3A0A0A0MS03 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.9■□□□□ 0.14
TRBV5-3A0A0A0MS03 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV5-3A0A0A0MS03 AC024909.3-201ENST00000611513 2257 ntBASIC15.9■□□□□ 0.14
TRBV5-3A0A0A0MS03 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV5-3A0A0A0MS03 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV5-3A0A0A0MS03 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC15.9■□□□□ 0.14
TRBV5-3A0A0A0MS03 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV5-3A0A0A0MS03 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
TRBV5-3A0A0A0MS03 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.9■□□□□ 0.14
TRBV5-3A0A0A0MS03 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.9■□□□□ 0.14
TRBV5-3A0A0A0MS03 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.9■□□□□ 0.14
TRBV5-3A0A0A0MS03 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
TRBV5-3A0A0A0MS03 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TRBV5-3A0A0A0MS03 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV5-3A0A0A0MS03 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV5-3A0A0A0MS03 AC008894.3-201ENST00000624324 3103 ntBASIC15.9■□□□□ 0.14
TRBV5-3A0A0A0MS03 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV5-3A0A0A0MS03 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV5-3A0A0A0MS03 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TRBV5-3A0A0A0MS03 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV5-3A0A0A0MS03 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TRBV5-3A0A0A0MS03 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV5-3A0A0A0MS03 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV5-3A0A0A0MS03 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.89■□□□□ 0.13
TRBV5-3A0A0A0MS03 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.89■□□□□ 0.13
TRBV5-3A0A0A0MS03 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV5-3A0A0A0MS03 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV5-3A0A0A0MS03 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV5-3A0A0A0MS03 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV5-3A0A0A0MS03 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV5-3A0A0A0MS03 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
TRBV5-3A0A0A0MS03 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms