Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCA3PQ9Y6N3 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CLCA3PQ9Y6N3 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
CLCA3PQ9Y6N3 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLCA3PQ9Y6N3 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLCA3PQ9Y6N3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLCA3PQ9Y6N3 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCA3PQ9Y6N3 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CLCA3PQ9Y6N3 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCA3PQ9Y6N3 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CLCA3PQ9Y6N3 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CLCA3PQ9Y6N3 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CLCA3PQ9Y6N3 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.14■□□□□ 0.17
CLCA3PQ9Y6N3 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCA3PQ9Y6N3 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CLCA3PQ9Y6N3 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CLCA3PQ9Y6N3 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCA3PQ9Y6N3 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.14■□□□□ 0.17
CLCA3PQ9Y6N3 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCA3PQ9Y6N3 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.14■□□□□ 0.17
CLCA3PQ9Y6N3 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CLCA3PQ9Y6N3 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.14■□□□□ 0.17
CLCA3PQ9Y6N3 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
CLCA3PQ9Y6N3 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CLCA3PQ9Y6N3 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.14■□□□□ 0.17
CLCA3PQ9Y6N3 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.14■□□□□ 0.17
CLCA3PQ9Y6N3 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
CLCA3PQ9Y6N3 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.14■□□□□ 0.17
CLCA3PQ9Y6N3 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.14■□□□□ 0.17
CLCA3PQ9Y6N3 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.14■□□□□ 0.17
CLCA3PQ9Y6N3 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLCA3PQ9Y6N3 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCA3PQ9Y6N3 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLCA3PQ9Y6N3 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLCA3PQ9Y6N3 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.14■□□□□ 0.17
CLCA3PQ9Y6N3 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLCA3PQ9Y6N3 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCA3PQ9Y6N3 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLCA3PQ9Y6N3 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CLCA3PQ9Y6N3 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLCA3PQ9Y6N3 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLCA3PQ9Y6N3 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLCA3PQ9Y6N3 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCA3PQ9Y6N3 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCA3PQ9Y6N3 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCA3PQ9Y6N3 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCA3PQ9Y6N3 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
CLCA3PQ9Y6N3 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLCA3PQ9Y6N3 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.13■□□□□ 0.17
CLCA3PQ9Y6N3 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
CLCA3PQ9Y6N3 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLCA3PQ9Y6N3 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CLCA3PQ9Y6N3 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLCA3PQ9Y6N3 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CLCA3PQ9Y6N3 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLCA3PQ9Y6N3 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLCA3PQ9Y6N3 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.13■□□□□ 0.17
CLCA3PQ9Y6N3 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.13■□□□□ 0.17
CLCA3PQ9Y6N3 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLCA3PQ9Y6N3 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.13■□□□□ 0.17
CLCA3PQ9Y6N3 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLCA3PQ9Y6N3 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLCA3PQ9Y6N3 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLCA3PQ9Y6N3 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.13■□□□□ 0.17
CLCA3PQ9Y6N3 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLCA3PQ9Y6N3 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.13■□□□□ 0.17
CLCA3PQ9Y6N3 AC092910.1-201ENST00000482027 1129 ntBASIC16.13■□□□□ 0.17
CLCA3PQ9Y6N3 RNA5SP419-201ENST00000515908 135 ntBASIC16.13■□□□□ 0.17
CLCA3PQ9Y6N3 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.13■□□□□ 0.17
CLCA3PQ9Y6N3 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
CLCA3PQ9Y6N3 AL049840.3-201ENST00000602669 611 ntBASIC16.13■□□□□ 0.17
CLCA3PQ9Y6N3 MIR7706-201ENST00000613747 67 ntBASIC16.13■□□□□ 0.17
CLCA3PQ9Y6N3 PGM5P2-202ENST00000637225 1043 ntBASIC16.13■□□□□ 0.17
CLCA3PQ9Y6N3 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.13■□□□□ 0.17
CLCA3PQ9Y6N3 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLCA3PQ9Y6N3 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLCA3PQ9Y6N3 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLCA3PQ9Y6N3 AL118508.1-201ENST00000613502 2345 ntBASIC16.13■□□□□ 0.17
CLCA3PQ9Y6N3 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLCA3PQ9Y6N3 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLCA3PQ9Y6N3 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLCA3PQ9Y6N3 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLCA3PQ9Y6N3 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CLCA3PQ9Y6N3 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLCA3PQ9Y6N3 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
CLCA3PQ9Y6N3 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLCA3PQ9Y6N3 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CLCA3PQ9Y6N3 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLCA3PQ9Y6N3 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLCA3PQ9Y6N3 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.12■□□□□ 0.17
CLCA3PQ9Y6N3 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.12■□□□□ 0.17
CLCA3PQ9Y6N3 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.12■□□□□ 0.17
CLCA3PQ9Y6N3 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLCA3PQ9Y6N3 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.12■□□□□ 0.17
CLCA3PQ9Y6N3 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.12■□□□□ 0.17
CLCA3PQ9Y6N3 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.12■□□□□ 0.17
CLCA3PQ9Y6N3 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.12■□□□□ 0.17
CLCA3PQ9Y6N3 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLCA3PQ9Y6N3 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLCA3PQ9Y6N3 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms