Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC25.31■■□□□ 1.64
CDC42BPBQ9Y5S2 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
CDC42BPBQ9Y5S2 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
CDC42BPBQ9Y5S2 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CDC42BPBQ9Y5S2 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC25.31■■□□□ 1.64
CDC42BPBQ9Y5S2 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC25.31■■□□□ 1.64
CDC42BPBQ9Y5S2 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
CDC42BPBQ9Y5S2 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC25.3■■□□□ 1.64
CDC42BPBQ9Y5S2 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC25.3■■□□□ 1.64
CDC42BPBQ9Y5S2 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CDC42BPBQ9Y5S2 CD276-201ENST00000318424 2738 ntTSL 5 BASIC25.3■■□□□ 1.64
CDC42BPBQ9Y5S2 BTBD7P1-201ENST00000447253 1453 ntBASIC25.3■■□□□ 1.64
CDC42BPBQ9Y5S2 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC25.3■■□□□ 1.64
CDC42BPBQ9Y5S2 WDR53-204ENST00000433160 887 ntTSL 5 BASIC25.3■■□□□ 1.64
CDC42BPBQ9Y5S2 PTPA-220ENST00000436883 532 ntTSL 4 BASIC25.3■■□□□ 1.64
CDC42BPBQ9Y5S2 POLE2-203ENST00000553805 496 ntTSL 2 BASIC25.3■■□□□ 1.64
CDC42BPBQ9Y5S2 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC25.3■■□□□ 1.64
CDC42BPBQ9Y5S2 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC25.3■■□□□ 1.64
CDC42BPBQ9Y5S2 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC25.3■■□□□ 1.64
CDC42BPBQ9Y5S2 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CDC42BPBQ9Y5S2 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
CDC42BPBQ9Y5S2 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
CDC42BPBQ9Y5S2 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC25.3■■□□□ 1.64
CDC42BPBQ9Y5S2 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CDC42BPBQ9Y5S2 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CDC42BPBQ9Y5S2 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CDC42BPBQ9Y5S2 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CDC42BPBQ9Y5S2 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
CDC42BPBQ9Y5S2 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CDC42BPBQ9Y5S2 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC25.29■■□□□ 1.64
CDC42BPBQ9Y5S2 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC25.29■■□□□ 1.64
CDC42BPBQ9Y5S2 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
CDC42BPBQ9Y5S2 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CDC42BPBQ9Y5S2 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC25.29■■□□□ 1.64
CDC42BPBQ9Y5S2 AC013467.2-201ENST00000605472 835 ntBASIC25.29■■□□□ 1.64
CDC42BPBQ9Y5S2 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CDC42BPBQ9Y5S2 AL671710.1-201ENST00000610245 2349 ntBASIC25.29■■□□□ 1.64
CDC42BPBQ9Y5S2 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC25.29■■□□□ 1.64
CDC42BPBQ9Y5S2 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CDC42BPBQ9Y5S2 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CDC42BPBQ9Y5S2 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CDC42BPBQ9Y5S2 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CDC42BPBQ9Y5S2 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CDC42BPBQ9Y5S2 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC25.29■■□□□ 1.64
CDC42BPBQ9Y5S2 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CDC42BPBQ9Y5S2 AL391825.1-201ENST00000457671 1364 ntBASIC25.29■■□□□ 1.64
CDC42BPBQ9Y5S2 PXK-206ENST00000463280 2825 ntTSL 2 BASIC25.29■■□□□ 1.64
CDC42BPBQ9Y5S2 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC25.29■■□□□ 1.64
CDC42BPBQ9Y5S2 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC25.29■■□□□ 1.64
CDC42BPBQ9Y5S2 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
CDC42BPBQ9Y5S2 AC119751.2-201ENST00000504529 210 ntBASIC25.29■■□□□ 1.64
CDC42BPBQ9Y5S2 AC135586.1-201ENST00000539323 574 ntBASIC25.29■■□□□ 1.64
CDC42BPBQ9Y5S2 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC25.29■■□□□ 1.64
CDC42BPBQ9Y5S2 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC25.29■■□□□ 1.64
CDC42BPBQ9Y5S2 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CDC42BPBQ9Y5S2 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
CDC42BPBQ9Y5S2 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
CDC42BPBQ9Y5S2 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CDC42BPBQ9Y5S2 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CDC42BPBQ9Y5S2 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC25.28■■□□□ 1.64
CDC42BPBQ9Y5S2 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CDC42BPBQ9Y5S2 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC25.28■■□□□ 1.64
CDC42BPBQ9Y5S2 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CDC42BPBQ9Y5S2 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CDC42BPBQ9Y5S2 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC25.28■■□□□ 1.64
CDC42BPBQ9Y5S2 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC25.28■■□□□ 1.64
CDC42BPBQ9Y5S2 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CDC42BPBQ9Y5S2 RN7SL837P-201ENST00000463010 287 ntBASIC25.28■■□□□ 1.64
CDC42BPBQ9Y5S2 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CDC42BPBQ9Y5S2 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC25.28■■□□□ 1.64
CDC42BPBQ9Y5S2 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CDC42BPBQ9Y5S2 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
CDC42BPBQ9Y5S2 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CDC42BPBQ9Y5S2 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
CDC42BPBQ9Y5S2 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CDC42BPBQ9Y5S2 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC25.28■■□□□ 1.64
CDC42BPBQ9Y5S2 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CDC42BPBQ9Y5S2 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC25.27■■□□□ 1.64
CDC42BPBQ9Y5S2 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC25.27■■□□□ 1.64
CDC42BPBQ9Y5S2 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CDC42BPBQ9Y5S2 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC25.27■■□□□ 1.64
CDC42BPBQ9Y5S2 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CDC42BPBQ9Y5S2 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC25.27■■□□□ 1.64
CDC42BPBQ9Y5S2 TMEM14DP-201ENST00000422205 345 ntBASIC25.27■■□□□ 1.64
CDC42BPBQ9Y5S2 DFFBP1-201ENST00000433250 979 ntBASIC25.27■■□□□ 1.64
CDC42BPBQ9Y5S2 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
CDC42BPBQ9Y5S2 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC25.27■■□□□ 1.64
CDC42BPBQ9Y5S2 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CDC42BPBQ9Y5S2 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CDC42BPBQ9Y5S2 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC25.27■■□□□ 1.64
CDC42BPBQ9Y5S2 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CDC42BPBQ9Y5S2 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC25.27■■□□□ 1.64
CDC42BPBQ9Y5S2 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CDC42BPBQ9Y5S2 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC25.27■■□□□ 1.64
CDC42BPBQ9Y5S2 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CDC42BPBQ9Y5S2 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
CDC42BPBQ9Y5S2 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC25.27■■□□□ 1.64
CDC42BPBQ9Y5S2 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CDC42BPBQ9Y5S2 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CDC42BPBQ9Y5S2 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms