Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB6Q9Y5F9 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PCDHGB6Q9Y5F9 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB6Q9Y5F9 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.16■□□□□ 0.18
PCDHGB6Q9Y5F9 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
PCDHGB6Q9Y5F9 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHGB6Q9Y5F9 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB6Q9Y5F9 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB6Q9Y5F9 AL591424.1-201ENST00000442569 1213 ntBASIC16.16■□□□□ 0.18
PCDHGB6Q9Y5F9 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.16■□□□□ 0.18
PCDHGB6Q9Y5F9 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHGB6Q9Y5F9 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB6Q9Y5F9 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.16■□□□□ 0.18
PCDHGB6Q9Y5F9 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.16■□□□□ 0.18
PCDHGB6Q9Y5F9 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB6Q9Y5F9 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PCDHGB6Q9Y5F9 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PCDHGB6Q9Y5F9 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB6Q9Y5F9 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
PCDHGB6Q9Y5F9 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB6Q9Y5F9 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB6Q9Y5F9 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB6Q9Y5F9 PMS2P7-201ENST00000506558 1336 ntBASIC16.16■□□□□ 0.18
PCDHGB6Q9Y5F9 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB6Q9Y5F9 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB6Q9Y5F9 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
PCDHGB6Q9Y5F9 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB6Q9Y5F9 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PCDHGB6Q9Y5F9 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB6Q9Y5F9 AC105020.1-201ENST00000435356 2205 ntBASIC16.15■□□□□ 0.18
PCDHGB6Q9Y5F9 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB6Q9Y5F9 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGB6Q9Y5F9 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB6Q9Y5F9 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGB6Q9Y5F9 AC133963.1-201ENST00000504166 1679 ntBASIC16.15■□□□□ 0.18
PCDHGB6Q9Y5F9 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB6Q9Y5F9 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PCDHGB6Q9Y5F9 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB6Q9Y5F9 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB6Q9Y5F9 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDHGB6Q9Y5F9 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB6Q9Y5F9 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.15■□□□□ 0.18
PCDHGB6Q9Y5F9 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB6Q9Y5F9 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
PCDHGB6Q9Y5F9 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB6Q9Y5F9 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGB6Q9Y5F9 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB6Q9Y5F9 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGB6Q9Y5F9 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB6Q9Y5F9 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB6Q9Y5F9 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB6Q9Y5F9 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB6Q9Y5F9 AC105339.3-201ENST00000560043 636 ntBASIC16.15■□□□□ 0.18
PCDHGB6Q9Y5F9 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGB6Q9Y5F9 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGB6Q9Y5F9 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB6Q9Y5F9 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.15■□□□□ 0.18
PCDHGB6Q9Y5F9 FAM197Y3-203ENST00000618346 717 ntBASIC16.15■□□□□ 0.18
PCDHGB6Q9Y5F9 PGM5P2-202ENST00000637225 1043 ntBASIC16.15■□□□□ 0.18
PCDHGB6Q9Y5F9 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
PCDHGB6Q9Y5F9 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
PCDHGB6Q9Y5F9 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB6Q9Y5F9 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB6Q9Y5F9 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB6Q9Y5F9 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB6Q9Y5F9 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB6Q9Y5F9 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB6Q9Y5F9 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
PCDHGB6Q9Y5F9 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.14■□□□□ 0.18
PCDHGB6Q9Y5F9 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
PCDHGB6Q9Y5F9 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.14■□□□□ 0.18
PCDHGB6Q9Y5F9 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
PCDHGB6Q9Y5F9 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB6Q9Y5F9 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB6Q9Y5F9 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDHGB6Q9Y5F9 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB6Q9Y5F9 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB6Q9Y5F9 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB6Q9Y5F9 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB6Q9Y5F9 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
PCDHGB6Q9Y5F9 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB6Q9Y5F9 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB6Q9Y5F9 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PCDHGB6Q9Y5F9 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB6Q9Y5F9 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PCDHGB6Q9Y5F9 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PCDHGB6Q9Y5F9 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PCDHGB6Q9Y5F9 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.14■□□□□ 0.17
PCDHGB6Q9Y5F9 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB6Q9Y5F9 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHGB6Q9Y5F9 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHGB6Q9Y5F9 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDHGB6Q9Y5F9 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB6Q9Y5F9 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHGB6Q9Y5F9 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PCDHGB6Q9Y5F9 MST1L-201ENST00000442552 2185 ntBASIC16.14■□□□□ 0.17
PCDHGB6Q9Y5F9 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB6Q9Y5F9 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB6Q9Y5F9 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB6Q9Y5F9 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms