Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
CHTOPQ9Y3Y2 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC12.3□□□□□ -0.44
CHTOPQ9Y3Y2 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC12.3□□□□□ -0.44
CHTOPQ9Y3Y2 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CHTOPQ9Y3Y2 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CHTOPQ9Y3Y2 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CHTOPQ9Y3Y2 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC12.3□□□□□ -0.44
CHTOPQ9Y3Y2 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CHTOPQ9Y3Y2 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC12.3□□□□□ -0.44
CHTOPQ9Y3Y2 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CHTOPQ9Y3Y2 TBC1D3P2-202ENST00000577902 1649 ntBASIC12.3□□□□□ -0.44
CHTOPQ9Y3Y2 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CHTOPQ9Y3Y2 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CHTOPQ9Y3Y2 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC12.3□□□□□ -0.44
CHTOPQ9Y3Y2 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
CHTOPQ9Y3Y2 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
CHTOPQ9Y3Y2 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
CHTOPQ9Y3Y2 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CHTOPQ9Y3Y2 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC12.3□□□□□ -0.44
CHTOPQ9Y3Y2 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CHTOPQ9Y3Y2 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CHTOPQ9Y3Y2 ME3-201ENST00000323418 1068 ntTSL 5 BASIC12.3□□□□□ -0.44
CHTOPQ9Y3Y2 DDX43P3-201ENST00000441064 443 ntBASIC12.3□□□□□ -0.44
CHTOPQ9Y3Y2 RHEB-204ENST00000472642 900 ntTSL 3 BASIC12.3□□□□□ -0.44
CHTOPQ9Y3Y2 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CHTOPQ9Y3Y2 UNC93B4-201ENST00000505679 747 ntBASIC12.3□□□□□ -0.44
CHTOPQ9Y3Y2 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC12.3□□□□□ -0.44
CHTOPQ9Y3Y2 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC12.3□□□□□ -0.44
CHTOPQ9Y3Y2 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC12.3□□□□□ -0.44
CHTOPQ9Y3Y2 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CHTOPQ9Y3Y2 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CHTOPQ9Y3Y2 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC12.3□□□□□ -0.44
CHTOPQ9Y3Y2 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
CHTOPQ9Y3Y2 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
CHTOPQ9Y3Y2 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC12.3□□□□□ -0.44
CHTOPQ9Y3Y2 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC12.3□□□□□ -0.44
CHTOPQ9Y3Y2 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CHTOPQ9Y3Y2 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CHTOPQ9Y3Y2 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
CHTOPQ9Y3Y2 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
CHTOPQ9Y3Y2 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.3□□□□□ -0.44
CHTOPQ9Y3Y2 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC12.3□□□□□ -0.44
CHTOPQ9Y3Y2 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
CHTOPQ9Y3Y2 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 AL391807.1-203ENST00000604392 2365 ntBASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 SNX18-202ENST00000343017 3140 ntBASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 AC131902.2-201ENST00000566892 2172 ntBASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 STRA6-206ENST00000449139 2732 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 AC097376.2-205ENST00000610159 5334 ntBASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 BUB3-202ENST00000368859 667 ntTSL 3 BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 AC004911.1-201ENST00000416316 871 ntBASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 AC011298.2-201ENST00000617989 482 ntBASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms