Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 KRT8P49-201ENST00000604166 1432 ntBASIC20.23■□□□□ 0.83
ZNRF3Q9ULT6 AL589739.1-201ENST00000607720 493 ntBASIC20.23■□□□□ 0.83
ZNRF3Q9ULT6 RNA5-8SN1-201ENST00000610460 153 ntBASIC20.23■□□□□ 0.83
ZNRF3Q9ULT6 RNA5-8SN5-202ENST00000612463 153 ntBASIC20.23■□□□□ 0.83
ZNRF3Q9ULT6 RNA5-8SN4-201ENST00000613359 153 ntBASIC20.23■□□□□ 0.83
ZNRF3Q9ULT6 RNA5-8SN5-201ENST00000619471 153 ntBASIC20.23■□□□□ 0.83
ZNRF3Q9ULT6 AC004840.1-201ENST00000636359 365 ntBASIC20.23■□□□□ 0.83
ZNRF3Q9ULT6 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.23■□□□□ 0.83
ZNRF3Q9ULT6 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZNRF3Q9ULT6 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNRF3Q9ULT6 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNRF3Q9ULT6 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNRF3Q9ULT6 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNRF3Q9ULT6 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
ZNRF3Q9ULT6 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.22■□□□□ 0.83
ZNRF3Q9ULT6 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNRF3Q9ULT6 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNRF3Q9ULT6 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZNRF3Q9ULT6 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNRF3Q9ULT6 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC20.22■□□□□ 0.83
ZNRF3Q9ULT6 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNRF3Q9ULT6 AC012317.2-201ENST00000623305 2251 ntBASIC20.22■□□□□ 0.83
ZNRF3Q9ULT6 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNRF3Q9ULT6 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZNRF3Q9ULT6 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC20.22■□□□□ 0.83
ZNRF3Q9ULT6 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC20.22■□□□□ 0.83
ZNRF3Q9ULT6 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC20.22■□□□□ 0.83
ZNRF3Q9ULT6 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
ZNRF3Q9ULT6 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
ZNRF3Q9ULT6 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC20.22■□□□□ 0.83
ZNRF3Q9ULT6 MTND6P24-201ENST00000440466 518 ntBASIC20.22■□□□□ 0.83
ZNRF3Q9ULT6 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZNRF3Q9ULT6 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC20.22■□□□□ 0.83
ZNRF3Q9ULT6 AC022494.1-201ENST00000466044 728 ntBASIC20.22■□□□□ 0.83
ZNRF3Q9ULT6 GIMAP3P-201ENST00000495150 836 ntBASIC20.22■□□□□ 0.83
ZNRF3Q9ULT6 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC20.22■□□□□ 0.83
ZNRF3Q9ULT6 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC20.22■□□□□ 0.83
ZNRF3Q9ULT6 RN7SL828P-201ENST00000607615 303 ntBASIC20.22■□□□□ 0.83
ZNRF3Q9ULT6 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC20.22■□□□□ 0.83
ZNRF3Q9ULT6 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.22■□□□□ 0.83
ZNRF3Q9ULT6 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNRF3Q9ULT6 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.22■□□□□ 0.83
ZNRF3Q9ULT6 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZNRF3Q9ULT6 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC20.22■□□□□ 0.83
ZNRF3Q9ULT6 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
ZNRF3Q9ULT6 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNRF3Q9ULT6 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC20.22■□□□□ 0.83
ZNRF3Q9ULT6 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.22■□□□□ 0.83
ZNRF3Q9ULT6 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC20.21■□□□□ 0.83
ZNRF3Q9ULT6 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZNRF3Q9ULT6 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC20.21■□□□□ 0.83
ZNRF3Q9ULT6 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
ZNRF3Q9ULT6 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZNRF3Q9ULT6 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZNRF3Q9ULT6 FAM220BP-201ENST00000377689 816 ntBASIC20.21■□□□□ 0.83
ZNRF3Q9ULT6 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
ZNRF3Q9ULT6 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC20.21■□□□□ 0.83
ZNRF3Q9ULT6 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC20.21■□□□□ 0.83
ZNRF3Q9ULT6 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
ZNRF3Q9ULT6 HILS1-202ENST00000545329 423 ntBASIC20.21■□□□□ 0.83
ZNRF3Q9ULT6 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZNRF3Q9ULT6 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC20.21■□□□□ 0.83
ZNRF3Q9ULT6 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC20.21■□□□□ 0.83
ZNRF3Q9ULT6 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC20.21■□□□□ 0.83
ZNRF3Q9ULT6 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNRF3Q9ULT6 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.21■□□□□ 0.83
ZNRF3Q9ULT6 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC20.21■□□□□ 0.83
ZNRF3Q9ULT6 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNRF3Q9ULT6 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNRF3Q9ULT6 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
ZNRF3Q9ULT6 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNRF3Q9ULT6 AC009113.1-201ENST00000570267 2443 ntBASIC20.21■□□□□ 0.83
ZNRF3Q9ULT6 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
ZNRF3Q9ULT6 AL021920.2-201ENST00000624828 1351 ntBASIC20.21■□□□□ 0.83
ZNRF3Q9ULT6 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.83
ZNRF3Q9ULT6 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.2■□□□□ 0.82
ZNRF3Q9ULT6 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZNRF3Q9ULT6 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
ZNRF3Q9ULT6 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
ZNRF3Q9ULT6 AC104581.1-202ENST00000635932 2618 ntBASIC20.2■□□□□ 0.82
ZNRF3Q9ULT6 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNRF3Q9ULT6 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
ZNRF3Q9ULT6 DGCR5-201ENST00000399539 862 ntBASIC20.2■□□□□ 0.82
ZNRF3Q9ULT6 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZNRF3Q9ULT6 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC20.2■□□□□ 0.82
ZNRF3Q9ULT6 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC20.2■□□□□ 0.82
ZNRF3Q9ULT6 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC20.2■□□□□ 0.82
ZNRF3Q9ULT6 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ZNRF3Q9ULT6 AC010336.2-201ENST00000564226 506 ntBASIC20.2■□□□□ 0.82
ZNRF3Q9ULT6 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC20.2■□□□□ 0.82
ZNRF3Q9ULT6 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC20.2■□□□□ 0.82
ZNRF3Q9ULT6 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
ZNRF3Q9ULT6 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC20.2■□□□□ 0.82
ZNRF3Q9ULT6 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNRF3Q9ULT6 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ZNRF3Q9ULT6 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.2■□□□□ 0.82
ZNRF3Q9ULT6 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC20.19■□□□□ 0.82
ZNRF3Q9ULT6 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNRF3Q9ULT6 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNRF3Q9ULT6 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms