Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
RIMBP3Q9UFD9 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC26.48■■□□□ 1.83
RIMBP3Q9UFD9 NAA38-207ENST00000576861 556 ntTSL 3 BASIC26.48■■□□□ 1.83
RIMBP3Q9UFD9 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
RIMBP3Q9UFD9 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RIMBP3Q9UFD9 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC26.48■■□□□ 1.83
RIMBP3Q9UFD9 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC26.48■■□□□ 1.83
RIMBP3Q9UFD9 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
RIMBP3Q9UFD9 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RIMBP3Q9UFD9 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC26.48■■□□□ 1.83
RIMBP3Q9UFD9 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC26.48■■□□□ 1.83
RIMBP3Q9UFD9 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RIMBP3Q9UFD9 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC26.48■■□□□ 1.83
RIMBP3Q9UFD9 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
RIMBP3Q9UFD9 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RIMBP3Q9UFD9 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
RIMBP3Q9UFD9 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RIMBP3Q9UFD9 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RIMBP3Q9UFD9 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC26.47■■□□□ 1.83
RIMBP3Q9UFD9 AL355864.2-201ENST00000447420 863 ntBASIC26.47■■□□□ 1.83
RIMBP3Q9UFD9 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
RIMBP3Q9UFD9 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC26.47■■□□□ 1.83
RIMBP3Q9UFD9 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
RIMBP3Q9UFD9 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC26.47■■□□□ 1.83
RIMBP3Q9UFD9 AC244452.3-201ENST00000636814 210 ntBASIC26.47■■□□□ 1.83
RIMBP3Q9UFD9 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RIMBP3Q9UFD9 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
RIMBP3Q9UFD9 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
RIMBP3Q9UFD9 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
RIMBP3Q9UFD9 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC26.47■■□□□ 1.83
RIMBP3Q9UFD9 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RIMBP3Q9UFD9 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
RIMBP3Q9UFD9 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
RIMBP3Q9UFD9 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RIMBP3Q9UFD9 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
RIMBP3Q9UFD9 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RIMBP3Q9UFD9 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
RIMBP3Q9UFD9 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
RIMBP3Q9UFD9 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
RIMBP3Q9UFD9 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC26.47■■□□□ 1.83
RIMBP3Q9UFD9 SPDYE17-201ENST00000412399 783 ntBASIC26.47■■□□□ 1.83
RIMBP3Q9UFD9 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
RIMBP3Q9UFD9 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
RIMBP3Q9UFD9 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC26.47■■□□□ 1.83
RIMBP3Q9UFD9 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC26.47■■□□□ 1.83
RIMBP3Q9UFD9 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC26.47■■□□□ 1.83
RIMBP3Q9UFD9 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC26.47■■□□□ 1.83
RIMBP3Q9UFD9 AC074044.1-201ENST00000609673 707 ntBASIC26.47■■□□□ 1.83
RIMBP3Q9UFD9 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC26.46■■□□□ 1.83
RIMBP3Q9UFD9 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC26.46■■□□□ 1.83
RIMBP3Q9UFD9 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RIMBP3Q9UFD9 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
RIMBP3Q9UFD9 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
RIMBP3Q9UFD9 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
RIMBP3Q9UFD9 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RIMBP3Q9UFD9 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RIMBP3Q9UFD9 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RIMBP3Q9UFD9 GNRHR2-203ENST00000581100 1187 ntBASIC26.46■■□□□ 1.83
RIMBP3Q9UFD9 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC26.46■■□□□ 1.83
RIMBP3Q9UFD9 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC26.45■■□□□ 1.83
RIMBP3Q9UFD9 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC26.45■■□□□ 1.83
RIMBP3Q9UFD9 HNRNPA1P48-201ENST00000562726 1377 ntBASIC26.45■■□□□ 1.83
RIMBP3Q9UFD9 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.83
RIMBP3Q9UFD9 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
RIMBP3Q9UFD9 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.82
RIMBP3Q9UFD9 FTLP1-201ENST00000449155 526 ntBASIC26.45■■□□□ 1.82
RIMBP3Q9UFD9 HNRNPA1P13-201ENST00000510646 963 ntBASIC26.45■■□□□ 1.82
RIMBP3Q9UFD9 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC26.45■■□□□ 1.82
RIMBP3Q9UFD9 AC020914.3-201ENST00000594712 304 ntBASIC26.45■■□□□ 1.82
RIMBP3Q9UFD9 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC26.45■■□□□ 1.82
RIMBP3Q9UFD9 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC26.45■■□□□ 1.82
RIMBP3Q9UFD9 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC26.45■■□□□ 1.82
RIMBP3Q9UFD9 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC26.45■■□□□ 1.82
RIMBP3Q9UFD9 AC093484.2-201ENST00000580996 2166 ntBASIC26.45■■□□□ 1.82
RIMBP3Q9UFD9 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
RIMBP3Q9UFD9 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC26.45■■□□□ 1.82
RIMBP3Q9UFD9 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
RIMBP3Q9UFD9 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
RIMBP3Q9UFD9 SLC9A3P2-201ENST00000447821 2021 ntBASIC26.44■■□□□ 1.82
RIMBP3Q9UFD9 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
RIMBP3Q9UFD9 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC26.44■■□□□ 1.82
RIMBP3Q9UFD9 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
RIMBP3Q9UFD9 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
RIMBP3Q9UFD9 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
RIMBP3Q9UFD9 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
RIMBP3Q9UFD9 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
RIMBP3Q9UFD9 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC26.44■■□□□ 1.82
RIMBP3Q9UFD9 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC26.44■■□□□ 1.82
RIMBP3Q9UFD9 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC26.44■■□□□ 1.82
RIMBP3Q9UFD9 PTP4A1P2-201ENST00000546033 454 ntBASIC26.44■■□□□ 1.82
RIMBP3Q9UFD9 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC26.44■■□□□ 1.82
RIMBP3Q9UFD9 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
RIMBP3Q9UFD9 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC26.44■■□□□ 1.82
RIMBP3Q9UFD9 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
RIMBP3Q9UFD9 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
RIMBP3Q9UFD9 AC126763.1-201ENST00000552015 2118 ntBASIC26.44■■□□□ 1.82
RIMBP3Q9UFD9 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC26.44■■□□□ 1.82
RIMBP3Q9UFD9 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC26.44■■□□□ 1.82
RIMBP3Q9UFD9 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
RIMBP3Q9UFD9 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms