Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AC073621.1-201ENST00000392730 636 ntBASIC17.77■□□□□ 0.44
PPARGC1AQ9UBK2 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.77■□□□□ 0.44
PPARGC1AQ9UBK2 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.77■□□□□ 0.44
PPARGC1AQ9UBK2 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.77■□□□□ 0.44
PPARGC1AQ9UBK2 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.77■□□□□ 0.44
PPARGC1AQ9UBK2 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.77■□□□□ 0.44
PPARGC1AQ9UBK2 AC105339.3-201ENST00000560043 636 ntBASIC17.77■□□□□ 0.44
PPARGC1AQ9UBK2 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
PPARGC1AQ9UBK2 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.77■□□□□ 0.44
PPARGC1AQ9UBK2 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.77■□□□□ 0.44
PPARGC1AQ9UBK2 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PPARGC1AQ9UBK2 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
PPARGC1AQ9UBK2 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.77■□□□□ 0.44
PPARGC1AQ9UBK2 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PPARGC1AQ9UBK2 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
PPARGC1AQ9UBK2 AL118508.1-201ENST00000613502 2345 ntBASIC17.77■□□□□ 0.43
PPARGC1AQ9UBK2 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
PPARGC1AQ9UBK2 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
PPARGC1AQ9UBK2 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PPARGC1AQ9UBK2 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.77■□□□□ 0.43
PPARGC1AQ9UBK2 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
PPARGC1AQ9UBK2 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PPARGC1AQ9UBK2 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PPARGC1AQ9UBK2 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
PPARGC1AQ9UBK2 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
PPARGC1AQ9UBK2 AL121761.2-201ENST00000598007 1648 ntBASIC17.76■□□□□ 0.43
PPARGC1AQ9UBK2 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.76■□□□□ 0.43
PPARGC1AQ9UBK2 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.76■□□□□ 0.43
PPARGC1AQ9UBK2 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PPARGC1AQ9UBK2 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.76■□□□□ 0.43
PPARGC1AQ9UBK2 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PPARGC1AQ9UBK2 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
PPARGC1AQ9UBK2 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PPARGC1AQ9UBK2 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PPARGC1AQ9UBK2 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.76■□□□□ 0.43
PPARGC1AQ9UBK2 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PPARGC1AQ9UBK2 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PPARGC1AQ9UBK2 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PPARGC1AQ9UBK2 AC093909.1-201ENST00000504731 1122 ntBASIC17.76■□□□□ 0.43
PPARGC1AQ9UBK2 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.76■□□□□ 0.43
PPARGC1AQ9UBK2 AC012640.2-201ENST00000561606 901 ntBASIC17.76■□□□□ 0.43
PPARGC1AQ9UBK2 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.76■□□□□ 0.43
PPARGC1AQ9UBK2 MIR7706-201ENST00000613747 67 ntBASIC17.76■□□□□ 0.43
PPARGC1AQ9UBK2 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.76■□□□□ 0.43
PPARGC1AQ9UBK2 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PPARGC1AQ9UBK2 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PPARGC1AQ9UBK2 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PPARGC1AQ9UBK2 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.76■□□□□ 0.43
PPARGC1AQ9UBK2 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PPARGC1AQ9UBK2 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PPARGC1AQ9UBK2 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
PPARGC1AQ9UBK2 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.76■□□□□ 0.43
PPARGC1AQ9UBK2 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PPARGC1AQ9UBK2 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
PPARGC1AQ9UBK2 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PPARGC1AQ9UBK2 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
PPARGC1AQ9UBK2 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PPARGC1AQ9UBK2 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PPARGC1AQ9UBK2 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.75■□□□□ 0.43
PPARGC1AQ9UBK2 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.75■□□□□ 0.43
PPARGC1AQ9UBK2 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PPARGC1AQ9UBK2 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PPARGC1AQ9UBK2 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PPARGC1AQ9UBK2 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PPARGC1AQ9UBK2 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PPARGC1AQ9UBK2 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PPARGC1AQ9UBK2 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PPARGC1AQ9UBK2 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PPARGC1AQ9UBK2 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.75■□□□□ 0.43
PPARGC1AQ9UBK2 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PPARGC1AQ9UBK2 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.75■□□□□ 0.43
PPARGC1AQ9UBK2 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
PPARGC1AQ9UBK2 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.75■□□□□ 0.43
PPARGC1AQ9UBK2 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.75■□□□□ 0.43
PPARGC1AQ9UBK2 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.75■□□□□ 0.43
PPARGC1AQ9UBK2 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.75■□□□□ 0.43
PPARGC1AQ9UBK2 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.75■□□□□ 0.43
PPARGC1AQ9UBK2 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PPARGC1AQ9UBK2 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.75■□□□□ 0.43
PPARGC1AQ9UBK2 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PPARGC1AQ9UBK2 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.75■□□□□ 0.43
PPARGC1AQ9UBK2 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PPARGC1AQ9UBK2 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PPARGC1AQ9UBK2 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
PPARGC1AQ9UBK2 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
PPARGC1AQ9UBK2 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PPARGC1AQ9UBK2 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
PPARGC1AQ9UBK2 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
PPARGC1AQ9UBK2 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PPARGC1AQ9UBK2 EGFEM1P-202ENST00000431685 1563 ntBASIC17.74■□□□□ 0.43
PPARGC1AQ9UBK2 AC006504.4-201ENST00000592118 1568 ntBASIC17.74■□□□□ 0.43
PPARGC1AQ9UBK2 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
PPARGC1AQ9UBK2 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PPARGC1AQ9UBK2 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.74■□□□□ 0.43
PPARGC1AQ9UBK2 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PPARGC1AQ9UBK2 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PPARGC1AQ9UBK2 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.74■□□□□ 0.43
PPARGC1AQ9UBK2 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PPARGC1AQ9UBK2 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PPARGC1AQ9UBK2 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms