Protein–RNA interactions for Protein: Q9H6F2

TMEM38A, Trimeric intracellular cation channel type A, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38AQ9H6F2 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM38AQ9H6F2 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM38AQ9H6F2 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM38AQ9H6F2 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM38AQ9H6F2 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM38AQ9H6F2 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM38AQ9H6F2 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
TMEM38AQ9H6F2 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM38AQ9H6F2 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
TMEM38AQ9H6F2 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.84■□□□□ 0.13
TMEM38AQ9H6F2 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.84■□□□□ 0.13
TMEM38AQ9H6F2 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM38AQ9H6F2 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.84■□□□□ 0.13
TMEM38AQ9H6F2 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM38AQ9H6F2 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.84■□□□□ 0.13
TMEM38AQ9H6F2 MIR5100-201ENST00000579544 119 ntBASIC15.84■□□□□ 0.13
TMEM38AQ9H6F2 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.84■□□□□ 0.13
TMEM38AQ9H6F2 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.84■□□□□ 0.13
TMEM38AQ9H6F2 TERC-201ENST00000602385 541 ntBASIC15.84■□□□□ 0.13
TMEM38AQ9H6F2 NPAP1P7-201ENST00000613027 823 ntBASIC15.84■□□□□ 0.13
TMEM38AQ9H6F2 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TMEM38AQ9H6F2 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
TMEM38AQ9H6F2 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM38AQ9H6F2 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.84■□□□□ 0.13
TMEM38AQ9H6F2 AL590787.1-201ENST00000568856 1315 ntBASIC15.84■□□□□ 0.13
TMEM38AQ9H6F2 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM38AQ9H6F2 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
TMEM38AQ9H6F2 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM38AQ9H6F2 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
TMEM38AQ9H6F2 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM38AQ9H6F2 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM38AQ9H6F2 ME2P1-201ENST00000426028 1970 ntBASIC15.84■□□□□ 0.13
TMEM38AQ9H6F2 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TMEM38AQ9H6F2 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.83■□□□□ 0.13
TMEM38AQ9H6F2 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TMEM38AQ9H6F2 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TMEM38AQ9H6F2 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TMEM38AQ9H6F2 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.83■□□□□ 0.13
TMEM38AQ9H6F2 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.83■□□□□ 0.13
TMEM38AQ9H6F2 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TMEM38AQ9H6F2 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM38AQ9H6F2 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM38AQ9H6F2 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.83■□□□□ 0.12
TMEM38AQ9H6F2 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.83■□□□□ 0.12
TMEM38AQ9H6F2 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM38AQ9H6F2 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM38AQ9H6F2 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM38AQ9H6F2 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM38AQ9H6F2 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM38AQ9H6F2 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
TMEM38AQ9H6F2 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM38AQ9H6F2 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM38AQ9H6F2 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM38AQ9H6F2 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM38AQ9H6F2 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM38AQ9H6F2 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.83■□□□□ 0.12
TMEM38AQ9H6F2 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
TMEM38AQ9H6F2 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.83■□□□□ 0.12
TMEM38AQ9H6F2 KRT18P21-201ENST00000515767 1272 ntBASIC15.83■□□□□ 0.12
TMEM38AQ9H6F2 AP000867.3-201ENST00000524675 377 ntBASIC15.83■□□□□ 0.12
TMEM38AQ9H6F2 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.83■□□□□ 0.12
TMEM38AQ9H6F2 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.83■□□□□ 0.12
TMEM38AQ9H6F2 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.83■□□□□ 0.12
TMEM38AQ9H6F2 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
TMEM38AQ9H6F2 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.83■□□□□ 0.12
TMEM38AQ9H6F2 AL353135.1-201ENST00000606729 504 ntBASIC15.83■□□□□ 0.12
TMEM38AQ9H6F2 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.83■□□□□ 0.12
TMEM38AQ9H6F2 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
TMEM38AQ9H6F2 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.83■□□□□ 0.12
TMEM38AQ9H6F2 AC243591.1-201ENST00000452967 1364 ntBASIC15.83■□□□□ 0.12
TMEM38AQ9H6F2 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM38AQ9H6F2 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM38AQ9H6F2 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM38AQ9H6F2 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM38AQ9H6F2 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
TMEM38AQ9H6F2 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM38AQ9H6F2 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM38AQ9H6F2 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM38AQ9H6F2 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM38AQ9H6F2 AC006277.1-201ENST00000624348 1610 ntBASIC15.83■□□□□ 0.12
TMEM38AQ9H6F2 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.82■□□□□ 0.12
TMEM38AQ9H6F2 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM38AQ9H6F2 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM38AQ9H6F2 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM38AQ9H6F2 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM38AQ9H6F2 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
TMEM38AQ9H6F2 AL662844.4-201ENST00000606367 2838 ntBASIC15.82■□□□□ 0.12
TMEM38AQ9H6F2 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.82■□□□□ 0.12
TMEM38AQ9H6F2 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM38AQ9H6F2 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM38AQ9H6F2 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM38AQ9H6F2 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.82■□□□□ 0.12
TMEM38AQ9H6F2 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM38AQ9H6F2 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM38AQ9H6F2 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TMEM38AQ9H6F2 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM38AQ9H6F2 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.82■□□□□ 0.12
TMEM38AQ9H6F2 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.82■□□□□ 0.12
TMEM38AQ9H6F2 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TMEM38AQ9H6F2 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms