Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNTNAP3Q9BZ76 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CNTNAP3Q9BZ76 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CNTNAP3Q9BZ76 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNTNAP3Q9BZ76 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNTNAP3Q9BZ76 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNTNAP3Q9BZ76 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.17■□□□□ 0.18
CNTNAP3Q9BZ76 AC104581.1-202ENST00000635932 2618 ntBASIC16.17■□□□□ 0.18
CNTNAP3Q9BZ76 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.17■□□□□ 0.18
CNTNAP3Q9BZ76 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.17■□□□□ 0.18
CNTNAP3Q9BZ76 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CNTNAP3Q9BZ76 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNTNAP3Q9BZ76 AC009113.1-201ENST00000570267 2443 ntBASIC16.17■□□□□ 0.18
CNTNAP3Q9BZ76 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNTNAP3Q9BZ76 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CNTNAP3Q9BZ76 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
CNTNAP3Q9BZ76 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNTNAP3Q9BZ76 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CNTNAP3Q9BZ76 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CNTNAP3Q9BZ76 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNTNAP3Q9BZ76 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CNTNAP3Q9BZ76 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
CNTNAP3Q9BZ76 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNTNAP3Q9BZ76 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CNTNAP3Q9BZ76 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC16.17■□□□□ 0.18
CNTNAP3Q9BZ76 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16.17■□□□□ 0.18
CNTNAP3Q9BZ76 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.17■□□□□ 0.18
CNTNAP3Q9BZ76 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.17■□□□□ 0.18
CNTNAP3Q9BZ76 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNTNAP3Q9BZ76 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.17■□□□□ 0.18
CNTNAP3Q9BZ76 AC009407.1-201ENST00000568958 598 ntBASIC16.17■□□□□ 0.18
CNTNAP3Q9BZ76 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.17■□□□□ 0.18
CNTNAP3Q9BZ76 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.17■□□□□ 0.18
CNTNAP3Q9BZ76 AC026740.1-201ENST00000607068 791 ntBASIC16.17■□□□□ 0.18
CNTNAP3Q9BZ76 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.17■□□□□ 0.18
CNTNAP3Q9BZ76 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.17■□□□□ 0.18
CNTNAP3Q9BZ76 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.17■□□□□ 0.18
CNTNAP3Q9BZ76 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.17■□□□□ 0.18
CNTNAP3Q9BZ76 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC16.17■□□□□ 0.18
CNTNAP3Q9BZ76 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CNTNAP3Q9BZ76 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.17■□□□□ 0.18
CNTNAP3Q9BZ76 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNTNAP3Q9BZ76 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.17■□□□□ 0.18
CNTNAP3Q9BZ76 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CNTNAP3Q9BZ76 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.17■□□□□ 0.18
CNTNAP3Q9BZ76 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CNTNAP3Q9BZ76 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNTNAP3Q9BZ76 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CNTNAP3Q9BZ76 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CNTNAP3Q9BZ76 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
CNTNAP3Q9BZ76 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.16■□□□□ 0.18
CNTNAP3Q9BZ76 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNTNAP3Q9BZ76 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNTNAP3Q9BZ76 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.16■□□□□ 0.18
CNTNAP3Q9BZ76 AC093677.2-201ENST00000600169 1863 ntBASIC16.16■□□□□ 0.18
CNTNAP3Q9BZ76 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNTNAP3Q9BZ76 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNTNAP3Q9BZ76 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNTNAP3Q9BZ76 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CNTNAP3Q9BZ76 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNTNAP3Q9BZ76 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CNTNAP3Q9BZ76 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNTNAP3Q9BZ76 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNTNAP3Q9BZ76 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.16■□□□□ 0.18
CNTNAP3Q9BZ76 ANKRD19P-201ENST00000338192 862 ntBASIC16.16■□□□□ 0.18
CNTNAP3Q9BZ76 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CNTNAP3Q9BZ76 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC16.16■□□□□ 0.18
CNTNAP3Q9BZ76 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.16■□□□□ 0.18
CNTNAP3Q9BZ76 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CNTNAP3Q9BZ76 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CNTNAP3Q9BZ76 AC079328.1-201ENST00000560358 952 ntBASIC16.16■□□□□ 0.18
CNTNAP3Q9BZ76 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CNTNAP3Q9BZ76 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.16■□□□□ 0.18
CNTNAP3Q9BZ76 CHCHD2P3-201ENST00000603038 451 ntBASIC16.16■□□□□ 0.18
CNTNAP3Q9BZ76 AC106872.11-201ENST00000605838 421 ntBASIC16.16■□□□□ 0.18
CNTNAP3Q9BZ76 AL161645.1-201ENST00000622716 1255 ntBASIC16.16■□□□□ 0.18
CNTNAP3Q9BZ76 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.16■□□□□ 0.18
CNTNAP3Q9BZ76 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNTNAP3Q9BZ76 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNTNAP3Q9BZ76 AC135050.7-201ENST00000624508 2218 ntBASIC16.16■□□□□ 0.18
CNTNAP3Q9BZ76 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.16■□□□□ 0.18
CNTNAP3Q9BZ76 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNTNAP3Q9BZ76 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNTNAP3Q9BZ76 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNTNAP3Q9BZ76 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.16■□□□□ 0.18
CNTNAP3Q9BZ76 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CNTNAP3Q9BZ76 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNTNAP3Q9BZ76 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.16■□□□□ 0.18
CNTNAP3Q9BZ76 HTR7P1-202ENST00000624664 4411 ntBASIC16.16■□□□□ 0.18
CNTNAP3Q9BZ76 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.16■□□□□ 0.18
CNTNAP3Q9BZ76 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNTNAP3Q9BZ76 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CNTNAP3Q9BZ76 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CNTNAP3Q9BZ76 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNTNAP3Q9BZ76 AL391825.1-201ENST00000457671 1364 ntBASIC16.15■□□□□ 0.18
CNTNAP3Q9BZ76 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
CNTNAP3Q9BZ76 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNTNAP3Q9BZ76 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNTNAP3Q9BZ76 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.15■□□□□ 0.18
CNTNAP3Q9BZ76 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms