Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.7■□□□□ 0.42
TRIM62Q9BVG3 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM62Q9BVG3 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM62Q9BVG3 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM62Q9BVG3 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.7■□□□□ 0.42
TRIM62Q9BVG3 AC140113.2-201ENST00000604370 208 ntBASIC17.7■□□□□ 0.42
TRIM62Q9BVG3 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.7■□□□□ 0.42
TRIM62Q9BVG3 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM62Q9BVG3 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM62Q9BVG3 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM62Q9BVG3 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM62Q9BVG3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM62Q9BVG3 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM62Q9BVG3 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TRIM62Q9BVG3 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM62Q9BVG3 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM62Q9BVG3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.69■□□□□ 0.42
TRIM62Q9BVG3 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM62Q9BVG3 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM62Q9BVG3 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM62Q9BVG3 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM62Q9BVG3 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM62Q9BVG3 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM62Q9BVG3 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM62Q9BVG3 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.69■□□□□ 0.42
TRIM62Q9BVG3 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM62Q9BVG3 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM62Q9BVG3 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TRIM62Q9BVG3 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.69■□□□□ 0.42
TRIM62Q9BVG3 MIR574-201ENST00000385209 96 ntBASIC17.69■□□□□ 0.42
TRIM62Q9BVG3 IGLL3P-201ENST00000412472 434 ntBASIC17.69■□□□□ 0.42
TRIM62Q9BVG3 AC007967.2-201ENST00000432613 625 ntBASIC17.69■□□□□ 0.42
TRIM62Q9BVG3 RHOQP3-201ENST00000437982 621 ntBASIC17.69■□□□□ 0.42
TRIM62Q9BVG3 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TRIM62Q9BVG3 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.69■□□□□ 0.42
TRIM62Q9BVG3 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.69■□□□□ 0.42
TRIM62Q9BVG3 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.69■□□□□ 0.42
TRIM62Q9BVG3 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM62Q9BVG3 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.69■□□□□ 0.42
TRIM62Q9BVG3 MPDU1-223ENST00000582151 728 ntBASIC17.69■□□□□ 0.42
TRIM62Q9BVG3 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.69■□□□□ 0.42
TRIM62Q9BVG3 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
TRIM62Q9BVG3 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.69■□□□□ 0.42
TRIM62Q9BVG3 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.69■□□□□ 0.42
TRIM62Q9BVG3 AC023141.13-201ENST00000604991 943 ntBASIC17.69■□□□□ 0.42
TRIM62Q9BVG3 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM62Q9BVG3 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.69■□□□□ 0.42
TRIM62Q9BVG3 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TRIM62Q9BVG3 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM62Q9BVG3 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.69■□□□□ 0.42
TRIM62Q9BVG3 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM62Q9BVG3 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM62Q9BVG3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.69■□□□□ 0.42
TRIM62Q9BVG3 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.69■□□□□ 0.42
TRIM62Q9BVG3 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM62Q9BVG3 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM62Q9BVG3 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM62Q9BVG3 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM62Q9BVG3 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM62Q9BVG3 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
TRIM62Q9BVG3 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM62Q9BVG3 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM62Q9BVG3 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM62Q9BVG3 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM62Q9BVG3 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM62Q9BVG3 AL513480.1-201ENST00000451731 511 ntBASIC17.68■□□□□ 0.42
TRIM62Q9BVG3 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM62Q9BVG3 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.68■□□□□ 0.42
TRIM62Q9BVG3 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM62Q9BVG3 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM62Q9BVG3 ACTL9-202ENST00000612068 1252 ntBASIC17.68■□□□□ 0.42
TRIM62Q9BVG3 AC010507.1-201ENST00000633895 436 ntBASIC17.68■□□□□ 0.42
TRIM62Q9BVG3 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
TRIM62Q9BVG3 CROCCP1-201ENST00000426910 5675 ntBASIC17.68■□□□□ 0.42
TRIM62Q9BVG3 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM62Q9BVG3 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM62Q9BVG3 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
TRIM62Q9BVG3 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM62Q9BVG3 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM62Q9BVG3 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM62Q9BVG3 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM62Q9BVG3 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM62Q9BVG3 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM62Q9BVG3 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM62Q9BVG3 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM62Q9BVG3 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.67■□□□□ 0.42
TRIM62Q9BVG3 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM62Q9BVG3 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM62Q9BVG3 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TRIM62Q9BVG3 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TRIM62Q9BVG3 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM62Q9BVG3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM62Q9BVG3 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.67■□□□□ 0.42
TRIM62Q9BVG3 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
TRIM62Q9BVG3 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM62Q9BVG3 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM62Q9BVG3 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM62Q9BVG3 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM62Q9BVG3 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
TRIM62Q9BVG3 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms