Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAF4Q9BUZ4 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF4Q9BUZ4 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF4Q9BUZ4 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF4Q9BUZ4 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF4Q9BUZ4 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF4Q9BUZ4 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF4Q9BUZ4 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TRAF4Q9BUZ4 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAF4Q9BUZ4 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAF4Q9BUZ4 AL671883.3-201ENST00000603274 991 ntBASIC15.29■□□□□ 0.04
TRAF4Q9BUZ4 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.29■□□□□ 0.04
TRAF4Q9BUZ4 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.29■□□□□ 0.04
TRAF4Q9BUZ4 AF228730.7-201ENST00000641842 219 ntBASIC15.29■□□□□ 0.04
TRAF4Q9BUZ4 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TRAF4Q9BUZ4 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF4Q9BUZ4 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF4Q9BUZ4 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
TRAF4Q9BUZ4 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAF4Q9BUZ4 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF4Q9BUZ4 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF4Q9BUZ4 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAF4Q9BUZ4 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.29■□□□□ 0.04
TRAF4Q9BUZ4 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF4Q9BUZ4 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF4Q9BUZ4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF4Q9BUZ4 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.29■□□□□ 0.04
TRAF4Q9BUZ4 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF4Q9BUZ4 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF4Q9BUZ4 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF4Q9BUZ4 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF4Q9BUZ4 GMCL1P1-201ENST00000463439 1581 ntBASIC15.28■□□□□ 0.04
TRAF4Q9BUZ4 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAF4Q9BUZ4 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TRAF4Q9BUZ4 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF4Q9BUZ4 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF4Q9BUZ4 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF4Q9BUZ4 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.28■□□□□ 0.04
TRAF4Q9BUZ4 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
TRAF4Q9BUZ4 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.28■□□□□ 0.04
TRAF4Q9BUZ4 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.28■□□□□ 0.04
TRAF4Q9BUZ4 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF4Q9BUZ4 PMS2P1-201ENST00000431037 1228 ntBASIC15.28■□□□□ 0.04
TRAF4Q9BUZ4 ABCD1P5-201ENST00000445663 754 ntBASIC15.28■□□□□ 0.04
TRAF4Q9BUZ4 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAF4Q9BUZ4 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.28■□□□□ 0.04
TRAF4Q9BUZ4 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAF4Q9BUZ4 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAF4Q9BUZ4 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF4Q9BUZ4 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF4Q9BUZ4 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF4Q9BUZ4 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF4Q9BUZ4 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF4Q9BUZ4 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF4Q9BUZ4 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF4Q9BUZ4 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF4Q9BUZ4 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TRAF4Q9BUZ4 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF4Q9BUZ4 AL355312.1-201ENST00000407115 2176 ntBASIC15.28■□□□□ 0.04
TRAF4Q9BUZ4 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAF4Q9BUZ4 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF4Q9BUZ4 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF4Q9BUZ4 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.27■□□□□ 0.04
TRAF4Q9BUZ4 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.27■□□□□ 0.04
TRAF4Q9BUZ4 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAF4Q9BUZ4 AP005117.1-201ENST00000584346 1413 ntBASIC15.27■□□□□ 0.04
TRAF4Q9BUZ4 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAF4Q9BUZ4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.27■□□□□ 0.04
TRAF4Q9BUZ4 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAF4Q9BUZ4 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAF4Q9BUZ4 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAF4Q9BUZ4 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAF4Q9BUZ4 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAF4Q9BUZ4 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAF4Q9BUZ4 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TRAF4Q9BUZ4 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TRAF4Q9BUZ4 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TRAF4Q9BUZ4 SLC25A1P1-201ENST00000528351 927 ntBASIC15.27■□□□□ 0.04
TRAF4Q9BUZ4 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAF4Q9BUZ4 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.27■□□□□ 0.04
TRAF4Q9BUZ4 MIR7706-201ENST00000613747 67 ntBASIC15.27■□□□□ 0.04
TRAF4Q9BUZ4 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.27■□□□□ 0.04
TRAF4Q9BUZ4 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.27■□□□□ 0.04
TRAF4Q9BUZ4 FAM215A-202ENST00000632077 792 ntBASIC15.27■□□□□ 0.04
TRAF4Q9BUZ4 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAF4Q9BUZ4 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.27■□□□□ 0.03
TRAF4Q9BUZ4 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.27■□□□□ 0.03
TRAF4Q9BUZ4 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.27■□□□□ 0.03
TRAF4Q9BUZ4 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.27■□□□□ 0.03
TRAF4Q9BUZ4 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
TRAF4Q9BUZ4 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.03
TRAF4Q9BUZ4 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.27■□□□□ 0.03
TRAF4Q9BUZ4 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.03
TRAF4Q9BUZ4 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAF4Q9BUZ4 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAF4Q9BUZ4 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAF4Q9BUZ4 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF4Q9BUZ4 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRAF4Q9BUZ4 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TRAF4Q9BUZ4 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms