Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 ARMC10P1-201ENST00000313754 855 ntBASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 PPIH-202ENST00000372549 327 ntTSL 3 BASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 AC109462.3-201ENST00000573934 613 ntBASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 AP002414.4-201ENST00000589764 1148 ntBASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 AL445228.2-201ENST00000605589 952 ntBASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 AC019129.2-201ENST00000609837 1235 ntBASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 AMT-250ENST00000637682 1823 ntTSL 5 BASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 DOC2GP-204ENST00000639052 2548 ntBASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC13.59□□□□□ -0.23
CHRDL1Q9BU40 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
CHRDL1Q9BU40 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CHRDL1Q9BU40 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
CHRDL1Q9BU40 AC233702.3-201ENST00000578656 1387 ntBASIC13.58□□□□□ -0.23
CHRDL1Q9BU40 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CHRDL1Q9BU40 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
CHRDL1Q9BU40 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
CHRDL1Q9BU40 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHRDL1Q9BU40 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CHRDL1Q9BU40 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHRDL1Q9BU40 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.58□□□□□ -0.24
CHRDL1Q9BU40 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC13.58□□□□□ -0.24
CHRDL1Q9BU40 AC105020.1-201ENST00000435356 2205 ntBASIC13.58□□□□□ -0.24
CHRDL1Q9BU40 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC13.58□□□□□ -0.24
CHRDL1Q9BU40 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHRDL1Q9BU40 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHRDL1Q9BU40 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHRDL1Q9BU40 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHRDL1Q9BU40 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC13.58□□□□□ -0.24
CHRDL1Q9BU40 FAM220CP-201ENST00000395253 831 ntBASIC13.58□□□□□ -0.24
CHRDL1Q9BU40 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC13.58□□□□□ -0.24
CHRDL1Q9BU40 DRAXINP1-201ENST00000437611 948 ntBASIC13.58□□□□□ -0.24
CHRDL1Q9BU40 TOB2P1-201ENST00000469761 992 ntBASIC13.58□□□□□ -0.24
CHRDL1Q9BU40 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC13.58□□□□□ -0.24
CHRDL1Q9BU40 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC13.58□□□□□ -0.24
CHRDL1Q9BU40 CIB2-208ENST00000560618 804 ntTSL 2 BASIC13.58□□□□□ -0.24
CHRDL1Q9BU40 TPSP2-201ENST00000561760 610 ntBASIC13.58□□□□□ -0.24
CHRDL1Q9BU40 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC13.58□□□□□ -0.24
CHRDL1Q9BU40 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CHRDL1Q9BU40 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CHRDL1Q9BU40 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHRDL1Q9BU40 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHRDL1Q9BU40 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CHRDL1Q9BU40 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHRDL1Q9BU40 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CHRDL1Q9BU40 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CHRDL1Q9BU40 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC13.58□□□□□ -0.24
CHRDL1Q9BU40 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHRDL1Q9BU40 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHRDL1Q9BU40 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CHRDL1Q9BU40 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CHRDL1Q9BU40 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHRDL1Q9BU40 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC13.58□□□□□ -0.24
CHRDL1Q9BU40 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC13.58□□□□□ -0.24
CHRDL1Q9BU40 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CHRDL1Q9BU40 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHRDL1Q9BU40 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms