Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
NOTCH4Q99466 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NOTCH4Q99466 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.32■□□□□ 0.36
NOTCH4Q99466 GAPDHP21-201ENST00000450301 1010 ntBASIC17.32■□□□□ 0.36
NOTCH4Q99466 AC009477.1-201ENST00000452936 217 ntBASIC17.32■□□□□ 0.36
NOTCH4Q99466 RN7SL692P-201ENST00000464677 288 ntBASIC17.32■□□□□ 0.36
NOTCH4Q99466 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.32■□□□□ 0.36
NOTCH4Q99466 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
NOTCH4Q99466 AC018529.1-201ENST00000613063 361 ntBASIC17.32■□□□□ 0.36
NOTCH4Q99466 TEX28P1-201ENST00000613479 1221 ntBASIC17.32■□□□□ 0.36
NOTCH4Q99466 TEX28P2-201ENST00000617764 1221 ntBASIC17.32■□□□□ 0.36
NOTCH4Q99466 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NOTCH4Q99466 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.32■□□□□ 0.36
NOTCH4Q99466 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NOTCH4Q99466 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
NOTCH4Q99466 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.32■□□□□ 0.36
NOTCH4Q99466 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NOTCH4Q99466 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.32■□□□□ 0.36
NOTCH4Q99466 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NOTCH4Q99466 SNX33P1-201ENST00000592116 1762 ntBASIC17.32■□□□□ 0.36
NOTCH4Q99466 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
NOTCH4Q99466 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NOTCH4Q99466 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NOTCH4Q99466 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
NOTCH4Q99466 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NOTCH4Q99466 AL080243.2-201ENST00000418783 582 ntBASIC17.31■□□□□ 0.36
NOTCH4Q99466 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.31■□□□□ 0.36
NOTCH4Q99466 AL844908.2-201ENST00000609461 460 ntBASIC17.31■□□□□ 0.36
NOTCH4Q99466 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
NOTCH4Q99466 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NOTCH4Q99466 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
NOTCH4Q99466 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.31■□□□□ 0.36
NOTCH4Q99466 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NOTCH4Q99466 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
NOTCH4Q99466 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.31■□□□□ 0.36
NOTCH4Q99466 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.31■□□□□ 0.36
NOTCH4Q99466 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
NOTCH4Q99466 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.31■□□□□ 0.36
NOTCH4Q99466 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.31■□□□□ 0.36
NOTCH4Q99466 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NOTCH4Q99466 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NOTCH4Q99466 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.31■□□□□ 0.36
NOTCH4Q99466 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NOTCH4Q99466 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NOTCH4Q99466 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NOTCH4Q99466 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NOTCH4Q99466 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.31■□□□□ 0.36
NOTCH4Q99466 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.31■□□□□ 0.36
NOTCH4Q99466 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.31■□□□□ 0.36
NOTCH4Q99466 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.31■□□□□ 0.36
NOTCH4Q99466 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.31■□□□□ 0.36
NOTCH4Q99466 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.31■□□□□ 0.36
NOTCH4Q99466 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
NOTCH4Q99466 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NOTCH4Q99466 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
NOTCH4Q99466 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.31■□□□□ 0.36
NOTCH4Q99466 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NOTCH4Q99466 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NOTCH4Q99466 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NOTCH4Q99466 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
NOTCH4Q99466 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NOTCH4Q99466 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NOTCH4Q99466 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
NOTCH4Q99466 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NOTCH4Q99466 AC073439.1-201ENST00000624121 1774 ntBASIC17.3■□□□□ 0.36
NOTCH4Q99466 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NOTCH4Q99466 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
NOTCH4Q99466 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.3■□□□□ 0.36
NOTCH4Q99466 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.3■□□□□ 0.36
NOTCH4Q99466 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
NOTCH4Q99466 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NOTCH4Q99466 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.3■□□□□ 0.36
NOTCH4Q99466 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.3■□□□□ 0.36
NOTCH4Q99466 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.3■□□□□ 0.36
NOTCH4Q99466 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.3■□□□□ 0.36
NOTCH4Q99466 AL133215.2-201ENST00000609242 977 ntBASIC17.3■□□□□ 0.36
NOTCH4Q99466 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
NOTCH4Q99466 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.3■□□□□ 0.36
NOTCH4Q99466 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NOTCH4Q99466 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NOTCH4Q99466 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NOTCH4Q99466 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NOTCH4Q99466 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NOTCH4Q99466 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.3■□□□□ 0.36
NOTCH4Q99466 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NOTCH4Q99466 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.3■□□□□ 0.36
NOTCH4Q99466 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NOTCH4Q99466 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.3■□□□□ 0.36
NOTCH4Q99466 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NOTCH4Q99466 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NOTCH4Q99466 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.3■□□□□ 0.36
NOTCH4Q99466 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NOTCH4Q99466 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.3■□□□□ 0.36
NOTCH4Q99466 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NOTCH4Q99466 AC003101.2-201ENST00000612557 442 ntBASIC17.3■□□□□ 0.36
NOTCH4Q99466 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.3■□□□□ 0.36
NOTCH4Q99466 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NOTCH4Q99466 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NOTCH4Q99466 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.29■□□□□ 0.36
NOTCH4Q99466 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms