Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC27.69■■■□□ 2.02
IFT140Q96RY7 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC27.69■■■□□ 2.02
IFT140Q96RY7 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC27.69■■■□□ 2.02
IFT140Q96RY7 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC27.69■■■□□ 2.02
IFT140Q96RY7 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC27.69■■■□□ 2.02
IFT140Q96RY7 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
IFT140Q96RY7 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC27.69■■■□□ 2.02
IFT140Q96RY7 FHL2-212ENST00000607522 759 ntTSL 2 BASIC27.69■■■□□ 2.02
IFT140Q96RY7 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
IFT140Q96RY7 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC27.68■■■□□ 2.02
IFT140Q96RY7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC27.68■■■□□ 2.02
IFT140Q96RY7 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC27.68■■■□□ 2.02
IFT140Q96RY7 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC27.68■■■□□ 2.02
IFT140Q96RY7 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
IFT140Q96RY7 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC27.68■■■□□ 2.02
IFT140Q96RY7 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC27.68■■■□□ 2.02
IFT140Q96RY7 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
IFT140Q96RY7 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC27.68■■■□□ 2.02
IFT140Q96RY7 GOLGA2P4-201ENST00000441462 777 ntBASIC27.68■■■□□ 2.02
IFT140Q96RY7 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC27.68■■■□□ 2.02
IFT140Q96RY7 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC27.68■■■□□ 2.02
IFT140Q96RY7 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC27.68■■■□□ 2.02
IFT140Q96RY7 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
IFT140Q96RY7 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC27.67■■■□□ 2.02
IFT140Q96RY7 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC27.67■■■□□ 2.02
IFT140Q96RY7 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC27.67■■■□□ 2.02
IFT140Q96RY7 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC27.67■■■□□ 2.02
IFT140Q96RY7 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC27.67■■■□□ 2.02
IFT140Q96RY7 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC27.67■■■□□ 2.02
IFT140Q96RY7 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC27.67■■■□□ 2.02
IFT140Q96RY7 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC27.67■■■□□ 2.02
IFT140Q96RY7 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC27.67■■■□□ 2.02
IFT140Q96RY7 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
IFT140Q96RY7 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
IFT140Q96RY7 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC27.67■■■□□ 2.02
IFT140Q96RY7 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC27.67■■■□□ 2.02
IFT140Q96RY7 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
IFT140Q96RY7 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC27.67■■■□□ 2.02
IFT140Q96RY7 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC27.67■■■□□ 2.02
IFT140Q96RY7 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC27.66■■■□□ 2.02
IFT140Q96RY7 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC27.66■■■□□ 2.02
IFT140Q96RY7 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC27.66■■■□□ 2.02
IFT140Q96RY7 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
IFT140Q96RY7 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
IFT140Q96RY7 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC27.66■■■□□ 2.02
IFT140Q96RY7 PAM16-204ENST00000571941 674 ntTSL 3 BASIC27.66■■■□□ 2.02
IFT140Q96RY7 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC27.66■■■□□ 2.02
IFT140Q96RY7 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
IFT140Q96RY7 PODN-203ENST00000395871 2744 ntTSL 5 BASIC27.66■■■□□ 2.02
IFT140Q96RY7 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC27.66■■■□□ 2.02
IFT140Q96RY7 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
IFT140Q96RY7 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC27.66■■■□□ 2.02
IFT140Q96RY7 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC27.66■■■□□ 2.02
IFT140Q96RY7 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC27.66■■■□□ 2.02
IFT140Q96RY7 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC27.66■■■□□ 2.02
IFT140Q96RY7 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
IFT140Q96RY7 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC27.66■■■□□ 2.02
IFT140Q96RY7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC27.65■■■□□ 2.02
IFT140Q96RY7 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC27.65■■■□□ 2.02
IFT140Q96RY7 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC27.65■■■□□ 2.02
IFT140Q96RY7 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
IFT140Q96RY7 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
IFT140Q96RY7 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC27.65■■■□□ 2.02
IFT140Q96RY7 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
IFT140Q96RY7 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC27.65■■■□□ 2.02
IFT140Q96RY7 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
IFT140Q96RY7 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
IFT140Q96RY7 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC27.65■■■□□ 2.02
IFT140Q96RY7 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
IFT140Q96RY7 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC27.65■■■□□ 2.02
IFT140Q96RY7 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC27.65■■■□□ 2.02
IFT140Q96RY7 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
IFT140Q96RY7 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
IFT140Q96RY7 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
IFT140Q96RY7 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC27.65■■■□□ 2.02
IFT140Q96RY7 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
IFT140Q96RY7 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC27.65■■■□□ 2.02
IFT140Q96RY7 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
IFT140Q96RY7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC27.65■■■□□ 2.02
IFT140Q96RY7 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC27.64■■■□□ 2.02
IFT140Q96RY7 ELK2AP-201ENST00000392510 1007 ntBASIC27.64■■■□□ 2.02
IFT140Q96RY7 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
IFT140Q96RY7 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
IFT140Q96RY7 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC27.64■■■□□ 2.02
IFT140Q96RY7 ZNF767P-206ENST00000513792 565 ntBASIC27.64■■■□□ 2.02
IFT140Q96RY7 RHOQP1-201ENST00000555758 579 ntBASIC27.64■■■□□ 2.02
IFT140Q96RY7 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC27.64■■■□□ 2.02
IFT140Q96RY7 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC27.64■■■□□ 2.02
IFT140Q96RY7 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC27.64■■■□□ 2.02
IFT140Q96RY7 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC27.64■■■□□ 2.02
IFT140Q96RY7 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.02
IFT140Q96RY7 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
IFT140Q96RY7 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC27.64■■■□□ 2.01
IFT140Q96RY7 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC27.64■■■□□ 2.01
IFT140Q96RY7 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC27.64■■■□□ 2.01
IFT140Q96RY7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
IFT140Q96RY7 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC27.64■■■□□ 2.01
IFT140Q96RY7 MIR1247-201ENST00000408206 136 ntBASIC27.64■■■□□ 2.01
IFT140Q96RY7 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC27.64■■■□□ 2.01
IFT140Q96RY7 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC27.64■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms