Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.34□□□□□ -0.11
CSMD1Q96PZ7 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.34□□□□□ -0.11
CSMD1Q96PZ7 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.34□□□□□ -0.11
CSMD1Q96PZ7 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CSMD1Q96PZ7 TEX28P1-201ENST00000613479 1221 ntBASIC14.34□□□□□ -0.11
CSMD1Q96PZ7 TEX28P2-201ENST00000617764 1221 ntBASIC14.34□□□□□ -0.11
CSMD1Q96PZ7 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
CSMD1Q96PZ7 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSMD1Q96PZ7 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.34□□□□□ -0.11
CSMD1Q96PZ7 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSMD1Q96PZ7 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CSMD1Q96PZ7 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSMD1Q96PZ7 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSMD1Q96PZ7 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.34□□□□□ -0.11
CSMD1Q96PZ7 AP3S2-216ENST00000617003 1561 ntBASIC14.34□□□□□ -0.11
CSMD1Q96PZ7 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CSMD1Q96PZ7 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.34□□□□□ -0.11
CSMD1Q96PZ7 KRT223P-202ENST00000449164 1292 ntBASIC14.34□□□□□ -0.11
CSMD1Q96PZ7 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.34□□□□□ -0.11
CSMD1Q96PZ7 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.34□□□□□ -0.11
CSMD1Q96PZ7 AL161645.1-201ENST00000622716 1255 ntBASIC14.34□□□□□ -0.11
CSMD1Q96PZ7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC14.34□□□□□ -0.11
CSMD1Q96PZ7 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSMD1Q96PZ7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSMD1Q96PZ7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC14.34□□□□□ -0.11
CSMD1Q96PZ7 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.33□□□□□ -0.11
CSMD1Q96PZ7 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CSMD1Q96PZ7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC14.33□□□□□ -0.11
CSMD1Q96PZ7 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
CSMD1Q96PZ7 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CSMD1Q96PZ7 ELK1P1-201ENST00000485699 580 ntBASIC14.33□□□□□ -0.11
CSMD1Q96PZ7 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.33□□□□□ -0.11
CSMD1Q96PZ7 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CSMD1Q96PZ7 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC14.33□□□□□ -0.11
CSMD1Q96PZ7 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CSMD1Q96PZ7 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.33□□□□□ -0.12
CSMD1Q96PZ7 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSMD1Q96PZ7 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSMD1Q96PZ7 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CSMD1Q96PZ7 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CSMD1Q96PZ7 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSMD1Q96PZ7 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSMD1Q96PZ7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC14.33□□□□□ -0.12
CSMD1Q96PZ7 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CSMD1Q96PZ7 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.33□□□□□ -0.12
CSMD1Q96PZ7 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CSMD1Q96PZ7 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.33□□□□□ -0.12
CSMD1Q96PZ7 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CSMD1Q96PZ7 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.33□□□□□ -0.12
CSMD1Q96PZ7 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.33□□□□□ -0.12
CSMD1Q96PZ7 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.33□□□□□ -0.12
CSMD1Q96PZ7 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.33□□□□□ -0.12
CSMD1Q96PZ7 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC14.33□□□□□ -0.12
CSMD1Q96PZ7 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC14.33□□□□□ -0.12
CSMD1Q96PZ7 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC14.32□□□□□ -0.12
CSMD1Q96PZ7 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSMD1Q96PZ7 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CSMD1Q96PZ7 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.32□□□□□ -0.12
CSMD1Q96PZ7 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.32□□□□□ -0.12
CSMD1Q96PZ7 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.32□□□□□ -0.12
CSMD1Q96PZ7 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.32□□□□□ -0.12
CSMD1Q96PZ7 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSMD1Q96PZ7 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
CSMD1Q96PZ7 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC14.32□□□□□ -0.12
CSMD1Q96PZ7 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CSMD1Q96PZ7 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSMD1Q96PZ7 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.32□□□□□ -0.12
CSMD1Q96PZ7 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.32□□□□□ -0.12
CSMD1Q96PZ7 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC14.32□□□□□ -0.12
CSMD1Q96PZ7 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CSMD1Q96PZ7 AL009183.1-201ENST00000603760 355 ntBASIC14.32□□□□□ -0.12
CSMD1Q96PZ7 AL021578.1-201ENST00000613646 709 ntBASIC14.32□□□□□ -0.12
CSMD1Q96PZ7 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CSMD1Q96PZ7 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSMD1Q96PZ7 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSMD1Q96PZ7 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC14.32□□□□□ -0.12
CSMD1Q96PZ7 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
CSMD1Q96PZ7 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CSMD1Q96PZ7 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CSMD1Q96PZ7 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSMD1Q96PZ7 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSMD1Q96PZ7 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSMD1Q96PZ7 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.32□□□□□ -0.12
CSMD1Q96PZ7 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.32□□□□□ -0.12
CSMD1Q96PZ7 AC103810.3-201ENST00000583567 96 ntBASIC14.32□□□□□ -0.12
CSMD1Q96PZ7 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CSMD1Q96PZ7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CSMD1Q96PZ7 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSMD1Q96PZ7 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 STK19B-204ENST00000512515 211 ntBASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 AC018529.1-201ENST00000613063 361 ntBASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms