Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SIPA1Q96FS4 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SIPA1Q96FS4 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SIPA1Q96FS4 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SIPA1Q96FS4 AL135744.1-201ENST00000565098 629 ntBASIC17.03■□□□□ 0.32
SIPA1Q96FS4 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.03■□□□□ 0.32
SIPA1Q96FS4 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.03■□□□□ 0.32
SIPA1Q96FS4 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.03■□□□□ 0.32
SIPA1Q96FS4 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SIPA1Q96FS4 AL353732.1-201ENST00000569618 1459 ntBASIC17.03■□□□□ 0.32
SIPA1Q96FS4 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SIPA1Q96FS4 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SIPA1Q96FS4 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.03■□□□□ 0.32
SIPA1Q96FS4 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SIPA1Q96FS4 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SIPA1Q96FS4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SIPA1Q96FS4 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SIPA1Q96FS4 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SIPA1Q96FS4 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SIPA1Q96FS4 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SIPA1Q96FS4 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SIPA1Q96FS4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SIPA1Q96FS4 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SIPA1Q96FS4 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.02■□□□□ 0.32
SIPA1Q96FS4 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
SIPA1Q96FS4 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SIPA1Q96FS4 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SIPA1Q96FS4 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SIPA1Q96FS4 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SIPA1Q96FS4 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SIPA1Q96FS4 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SIPA1Q96FS4 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SIPA1Q96FS4 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.02■□□□□ 0.32
SIPA1Q96FS4 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.02■□□□□ 0.32
SIPA1Q96FS4 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SIPA1Q96FS4 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.02■□□□□ 0.32
SIPA1Q96FS4 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.02■□□□□ 0.32
SIPA1Q96FS4 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.02■□□□□ 0.32
SIPA1Q96FS4 DUX4L17-201ENST00000557360 1267 ntBASIC17.02■□□□□ 0.32
SIPA1Q96FS4 AC243562.1-201ENST00000560672 389 ntBASIC17.02■□□□□ 0.32
SIPA1Q96FS4 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.02■□□□□ 0.32
SIPA1Q96FS4 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.31
SIPA1Q96FS4 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.31
SIPA1Q96FS4 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
SIPA1Q96FS4 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SIPA1Q96FS4 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
SIPA1Q96FS4 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.02■□□□□ 0.31
SIPA1Q96FS4 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.02■□□□□ 0.31
SIPA1Q96FS4 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
SIPA1Q96FS4 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.02■□□□□ 0.31
SIPA1Q96FS4 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SIPA1Q96FS4 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.01■□□□□ 0.31
SIPA1Q96FS4 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIPA1Q96FS4 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SIPA1Q96FS4 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIPA1Q96FS4 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.01■□□□□ 0.31
SIPA1Q96FS4 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIPA1Q96FS4 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.01■□□□□ 0.31
SIPA1Q96FS4 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SIPA1Q96FS4 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIPA1Q96FS4 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIPA1Q96FS4 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIPA1Q96FS4 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIPA1Q96FS4 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.01■□□□□ 0.31
SIPA1Q96FS4 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIPA1Q96FS4 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SIPA1Q96FS4 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SIPA1Q96FS4 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SIPA1Q96FS4 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.01■□□□□ 0.31
SIPA1Q96FS4 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.01■□□□□ 0.31
SIPA1Q96FS4 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.01■□□□□ 0.31
SIPA1Q96FS4 AL009183.1-201ENST00000603760 355 ntBASIC17.01■□□□□ 0.31
SIPA1Q96FS4 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SIPA1Q96FS4 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
SIPA1Q96FS4 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIPA1Q96FS4 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SIPA1Q96FS4 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.01■□□□□ 0.31
SIPA1Q96FS4 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SIPA1Q96FS4 EGFEM1P-202ENST00000431685 1563 ntBASIC17.01■□□□□ 0.31
SIPA1Q96FS4 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIPA1Q96FS4 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.01■□□□□ 0.31
SIPA1Q96FS4 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SIPA1Q96FS4 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.01■□□□□ 0.31
SIPA1Q96FS4 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SIPA1Q96FS4 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SIPA1Q96FS4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIPA1Q96FS4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SIPA1Q96FS4 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIPA1Q96FS4 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.01■□□□□ 0.31
SIPA1Q96FS4 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
SIPA1Q96FS4 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SIPA1Q96FS4 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SIPA1Q96FS4 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17■□□□□ 0.31
SIPA1Q96FS4 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17■□□□□ 0.31
SIPA1Q96FS4 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SIPA1Q96FS4 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SIPA1Q96FS4 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SIPA1Q96FS4 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SIPA1Q96FS4 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17■□□□□ 0.31
SIPA1Q96FS4 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms