Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.27■□□□□ 0.52
TRIM43Q96BQ3 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
TRIM43Q96BQ3 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM43Q96BQ3 AC105021.1-202ENST00000570572 669 ntBASIC18.27■□□□□ 0.52
TRIM43Q96BQ3 APOC4-201ENST00000591600 348 ntTSL 3 BASIC18.27■□□□□ 0.52
TRIM43Q96BQ3 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
TRIM43Q96BQ3 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.27■□□□□ 0.52
TRIM43Q96BQ3 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.27■□□□□ 0.52
TRIM43Q96BQ3 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.27■□□□□ 0.52
TRIM43Q96BQ3 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM43Q96BQ3 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
TRIM43Q96BQ3 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.27■□□□□ 0.52
TRIM43Q96BQ3 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM43Q96BQ3 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM43Q96BQ3 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM43Q96BQ3 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM43Q96BQ3 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM43Q96BQ3 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
TRIM43Q96BQ3 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM43Q96BQ3 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
TRIM43Q96BQ3 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM43Q96BQ3 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM43Q96BQ3 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM43Q96BQ3 BTBD7P1-201ENST00000447253 1453 ntBASIC18.26■□□□□ 0.51
TRIM43Q96BQ3 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.26■□□□□ 0.51
TRIM43Q96BQ3 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM43Q96BQ3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM43Q96BQ3 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM43Q96BQ3 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM43Q96BQ3 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM43Q96BQ3 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.26■□□□□ 0.51
TRIM43Q96BQ3 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM43Q96BQ3 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.26■□□□□ 0.51
TRIM43Q96BQ3 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TRIM43Q96BQ3 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.26■□□□□ 0.51
TRIM43Q96BQ3 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
TRIM43Q96BQ3 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM43Q96BQ3 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM43Q96BQ3 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.26■□□□□ 0.51
TRIM43Q96BQ3 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC18.26■□□□□ 0.51
TRIM43Q96BQ3 AL080243.2-201ENST00000418783 582 ntBASIC18.26■□□□□ 0.51
TRIM43Q96BQ3 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC18.26■□□□□ 0.51
TRIM43Q96BQ3 RN7SL837P-201ENST00000463010 287 ntBASIC18.26■□□□□ 0.51
TRIM43Q96BQ3 PRYP6-201ENST00000514804 343 ntBASIC18.26■□□□□ 0.51
TRIM43Q96BQ3 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC18.26■□□□□ 0.51
TRIM43Q96BQ3 ZNF890P-202ENST00000530367 1156 ntBASIC18.26■□□□□ 0.51
TRIM43Q96BQ3 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.26■□□□□ 0.51
TRIM43Q96BQ3 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC18.26■□□□□ 0.51
TRIM43Q96BQ3 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC18.26■□□□□ 0.51
TRIM43Q96BQ3 CYP2A7P1-201ENST00000595391 815 ntBASIC18.26■□□□□ 0.51
TRIM43Q96BQ3 AL512343.1-201ENST00000605837 169 ntBASIC18.26■□□□□ 0.51
TRIM43Q96BQ3 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.26■□□□□ 0.51
TRIM43Q96BQ3 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TRIM43Q96BQ3 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TRIM43Q96BQ3 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
TRIM43Q96BQ3 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.26■□□□□ 0.51
TRIM43Q96BQ3 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM43Q96BQ3 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM43Q96BQ3 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM43Q96BQ3 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM43Q96BQ3 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM43Q96BQ3 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM43Q96BQ3 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM43Q96BQ3 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM43Q96BQ3 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC18.25■□□□□ 0.51
TRIM43Q96BQ3 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM43Q96BQ3 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM43Q96BQ3 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM43Q96BQ3 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM43Q96BQ3 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TRIM43Q96BQ3 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.25■□□□□ 0.51
TRIM43Q96BQ3 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM43Q96BQ3 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM43Q96BQ3 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM43Q96BQ3 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM43Q96BQ3 AC119751.2-201ENST00000504529 210 ntBASIC18.25■□□□□ 0.51
TRIM43Q96BQ3 SPDYE18-201ENST00000510091 1050 ntBASIC18.25■□□□□ 0.51
TRIM43Q96BQ3 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM43Q96BQ3 AL079307.3-201ENST00000556114 283 ntBASIC18.25■□□□□ 0.51
TRIM43Q96BQ3 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM43Q96BQ3 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM43Q96BQ3 AC007431.3-201ENST00000623221 587 ntBASIC18.25■□□□□ 0.51
TRIM43Q96BQ3 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM43Q96BQ3 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM43Q96BQ3 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM43Q96BQ3 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM43Q96BQ3 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TRIM43Q96BQ3 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM43Q96BQ3 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM43Q96BQ3 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM43Q96BQ3 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM43Q96BQ3 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TRIM43Q96BQ3 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
TRIM43Q96BQ3 AC138028.4-201ENST00000564984 1845 ntBASIC18.24■□□□□ 0.51
TRIM43Q96BQ3 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM43Q96BQ3 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM43Q96BQ3 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM43Q96BQ3 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
TRIM43Q96BQ3 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM43Q96BQ3 FAM220BP-201ENST00000377689 816 ntBASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms