Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.41■□□□□ 0.22
VPS33AQ96AX1 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.41■□□□□ 0.22
VPS33AQ96AX1 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.41■□□□□ 0.22
VPS33AQ96AX1 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS33AQ96AX1 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS33AQ96AX1 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
VPS33AQ96AX1 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS33AQ96AX1 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS33AQ96AX1 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VPS33AQ96AX1 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VPS33AQ96AX1 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS33AQ96AX1 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VPS33AQ96AX1 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS33AQ96AX1 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS33AQ96AX1 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.41■□□□□ 0.22
VPS33AQ96AX1 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS33AQ96AX1 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
VPS33AQ96AX1 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VPS33AQ96AX1 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS33AQ96AX1 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
VPS33AQ96AX1 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS33AQ96AX1 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
VPS33AQ96AX1 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VPS33AQ96AX1 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
VPS33AQ96AX1 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VPS33AQ96AX1 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
VPS33AQ96AX1 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VPS33AQ96AX1 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VPS33AQ96AX1 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.4■□□□□ 0.22
VPS33AQ96AX1 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.4■□□□□ 0.22
VPS33AQ96AX1 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
VPS33AQ96AX1 AC009336.1-201ENST00000608941 1553 ntBASIC16.4■□□□□ 0.22
VPS33AQ96AX1 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
VPS33AQ96AX1 AL645929.1-201ENST00000420084 975 ntBASIC16.4■□□□□ 0.22
VPS33AQ96AX1 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.4■□□□□ 0.22
VPS33AQ96AX1 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
VPS33AQ96AX1 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.4■□□□□ 0.22
VPS33AQ96AX1 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.4■□□□□ 0.22
VPS33AQ96AX1 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.4■□□□□ 0.22
VPS33AQ96AX1 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.4■□□□□ 0.22
VPS33AQ96AX1 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.4■□□□□ 0.22
VPS33AQ96AX1 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
VPS33AQ96AX1 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
VPS33AQ96AX1 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
VPS33AQ96AX1 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.4■□□□□ 0.22
VPS33AQ96AX1 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
VPS33AQ96AX1 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
VPS33AQ96AX1 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.4■□□□□ 0.22
VPS33AQ96AX1 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.4■□□□□ 0.22
VPS33AQ96AX1 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VPS33AQ96AX1 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VPS33AQ96AX1 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VPS33AQ96AX1 AC132872.4-202ENST00000622924 2756 ntBASIC16.4■□□□□ 0.22
VPS33AQ96AX1 AL353593.2-201ENST00000602529 1483 ntBASIC16.4■□□□□ 0.22
VPS33AQ96AX1 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
VPS33AQ96AX1 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VPS33AQ96AX1 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VPS33AQ96AX1 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.4■□□□□ 0.22
VPS33AQ96AX1 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
VPS33AQ96AX1 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
VPS33AQ96AX1 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VPS33AQ96AX1 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.4■□□□□ 0.22
VPS33AQ96AX1 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.39■□□□□ 0.22
VPS33AQ96AX1 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.22
VPS33AQ96AX1 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.39■□□□□ 0.22
VPS33AQ96AX1 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
VPS33AQ96AX1 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VPS33AQ96AX1 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VPS33AQ96AX1 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.39■□□□□ 0.21
VPS33AQ96AX1 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VPS33AQ96AX1 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VPS33AQ96AX1 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.39■□□□□ 0.21
VPS33AQ96AX1 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VPS33AQ96AX1 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
VPS33AQ96AX1 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
VPS33AQ96AX1 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
VPS33AQ96AX1 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
VPS33AQ96AX1 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VPS33AQ96AX1 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
VPS33AQ96AX1 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.39■□□□□ 0.21
VPS33AQ96AX1 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
VPS33AQ96AX1 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.39■□□□□ 0.21
VPS33AQ96AX1 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
VPS33AQ96AX1 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.39■□□□□ 0.21
VPS33AQ96AX1 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.39■□□□□ 0.21
VPS33AQ96AX1 STK19B-204ENST00000512515 211 ntBASIC16.39■□□□□ 0.21
VPS33AQ96AX1 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VPS33AQ96AX1 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.39■□□□□ 0.21
VPS33AQ96AX1 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.39■□□□□ 0.21
VPS33AQ96AX1 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.39■□□□□ 0.21
VPS33AQ96AX1 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
VPS33AQ96AX1 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.39■□□□□ 0.21
VPS33AQ96AX1 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
VPS33AQ96AX1 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
VPS33AQ96AX1 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.39■□□□□ 0.21
VPS33AQ96AX1 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VPS33AQ96AX1 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
VPS33AQ96AX1 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
VPS33AQ96AX1 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.39■□□□□ 0.21
VPS33AQ96AX1 GPR89P-201ENST00000407924 1495 ntBASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms