Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ATP2A3Q93084 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.97■□□□□ 0.47
ATP2A3Q93084 AC097637.2-201ENST00000624096 1997 ntBASIC17.97■□□□□ 0.47
ATP2A3Q93084 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.97■□□□□ 0.47
ATP2A3Q93084 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP2A3Q93084 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP2A3Q93084 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP2A3Q93084 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.96■□□□□ 0.47
ATP2A3Q93084 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ATP2A3Q93084 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.96■□□□□ 0.47
ATP2A3Q93084 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP2A3Q93084 GPR89P-201ENST00000407924 1495 ntBASIC17.96■□□□□ 0.47
ATP2A3Q93084 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
ATP2A3Q93084 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP2A3Q93084 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
ATP2A3Q93084 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ATP2A3Q93084 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP2A3Q93084 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP2A3Q93084 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.96■□□□□ 0.47
ATP2A3Q93084 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
ATP2A3Q93084 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP2A3Q93084 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.96■□□□□ 0.47
ATP2A3Q93084 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.96■□□□□ 0.47
ATP2A3Q93084 KRT18P2-201ENST00000447938 1258 ntBASIC17.96■□□□□ 0.47
ATP2A3Q93084 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.96■□□□□ 0.47
ATP2A3Q93084 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.96■□□□□ 0.47
ATP2A3Q93084 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.96■□□□□ 0.47
ATP2A3Q93084 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.96■□□□□ 0.47
ATP2A3Q93084 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.96■□□□□ 0.47
ATP2A3Q93084 AP001160.2-201ENST00000596071 487 ntBASIC17.96■□□□□ 0.47
ATP2A3Q93084 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.96■□□□□ 0.47
ATP2A3Q93084 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ATP2A3Q93084 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ATP2A3Q93084 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP2A3Q93084 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP2A3Q93084 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
ATP2A3Q93084 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
ATP2A3Q93084 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP2A3Q93084 AC133963.1-201ENST00000504166 1679 ntBASIC17.96■□□□□ 0.47
ATP2A3Q93084 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
ATP2A3Q93084 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
ATP2A3Q93084 AL138688.1-201ENST00000624851 1594 ntBASIC17.96■□□□□ 0.46
ATP2A3Q93084 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.95■□□□□ 0.46
ATP2A3Q93084 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP2A3Q93084 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ATP2A3Q93084 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ATP2A3Q93084 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP2A3Q93084 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP2A3Q93084 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP2A3Q93084 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ATP2A3Q93084 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
ATP2A3Q93084 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP2A3Q93084 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.95■□□□□ 0.46
ATP2A3Q93084 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
ATP2A3Q93084 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ATP2A3Q93084 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
ATP2A3Q93084 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.95■□□□□ 0.46
ATP2A3Q93084 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.95■□□□□ 0.46
ATP2A3Q93084 MCCD1P2-201ENST00000423228 335 ntBASIC17.95■□□□□ 0.46
ATP2A3Q93084 RPS8P6-201ENST00000426177 609 ntBASIC17.95■□□□□ 0.46
ATP2A3Q93084 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ATP2A3Q93084 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP2A3Q93084 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.95■□□□□ 0.46
ATP2A3Q93084 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.95■□□□□ 0.46
ATP2A3Q93084 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.95■□□□□ 0.46
ATP2A3Q93084 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.95■□□□□ 0.46
ATP2A3Q93084 AC134684.3-201ENST00000641758 218 ntBASIC17.95■□□□□ 0.46
ATP2A3Q93084 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP2A3Q93084 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP2A3Q93084 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP2A3Q93084 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.95■□□□□ 0.46
ATP2A3Q93084 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
ATP2A3Q93084 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
ATP2A3Q93084 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP2A3Q93084 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.95■□□□□ 0.46
ATP2A3Q93084 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ATP2A3Q93084 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP2A3Q93084 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
ATP2A3Q93084 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.94■□□□□ 0.46
ATP2A3Q93084 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATP2A3Q93084 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
ATP2A3Q93084 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.94■□□□□ 0.46
ATP2A3Q93084 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.94■□□□□ 0.46
ATP2A3Q93084 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATP2A3Q93084 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ATP2A3Q93084 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ATP2A3Q93084 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.94■□□□□ 0.46
ATP2A3Q93084 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ATP2A3Q93084 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ATP2A3Q93084 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATP2A3Q93084 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATP2A3Q93084 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATP2A3Q93084 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.94■□□□□ 0.46
ATP2A3Q93084 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.94■□□□□ 0.46
ATP2A3Q93084 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATP2A3Q93084 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.94■□□□□ 0.46
ATP2A3Q93084 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.94■□□□□ 0.46
ATP2A3Q93084 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.94■□□□□ 0.46
ATP2A3Q93084 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.94■□□□□ 0.46
ATP2A3Q93084 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms