Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NUP43Q8NFH3 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.94■□□□□ 0.14
NUP43Q8NFH3 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
NUP43Q8NFH3 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.94■□□□□ 0.14
NUP43Q8NFH3 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NUP43Q8NFH3 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.94■□□□□ 0.14
NUP43Q8NFH3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
NUP43Q8NFH3 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.94■□□□□ 0.14
NUP43Q8NFH3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NUP43Q8NFH3 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NUP43Q8NFH3 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.94■□□□□ 0.14
NUP43Q8NFH3 AL021920.2-201ENST00000624828 1351 ntBASIC15.94■□□□□ 0.14
NUP43Q8NFH3 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NUP43Q8NFH3 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NUP43Q8NFH3 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.94■□□□□ 0.14
NUP43Q8NFH3 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NUP43Q8NFH3 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.94■□□□□ 0.14
NUP43Q8NFH3 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NUP43Q8NFH3 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
NUP43Q8NFH3 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NUP43Q8NFH3 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NUP43Q8NFH3 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NUP43Q8NFH3 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NUP43Q8NFH3 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NUP43Q8NFH3 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NUP43Q8NFH3 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.94■□□□□ 0.14
NUP43Q8NFH3 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.94■□□□□ 0.14
NUP43Q8NFH3 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NUP43Q8NFH3 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NUP43Q8NFH3 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.93■□□□□ 0.14
NUP43Q8NFH3 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
NUP43Q8NFH3 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
NUP43Q8NFH3 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NUP43Q8NFH3 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
NUP43Q8NFH3 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
NUP43Q8NFH3 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.93■□□□□ 0.14
NUP43Q8NFH3 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
NUP43Q8NFH3 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
NUP43Q8NFH3 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
NUP43Q8NFH3 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.93■□□□□ 0.14
NUP43Q8NFH3 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NUP43Q8NFH3 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NUP43Q8NFH3 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.93■□□□□ 0.14
NUP43Q8NFH3 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.93■□□□□ 0.14
NUP43Q8NFH3 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.93■□□□□ 0.14
NUP43Q8NFH3 AP002490.2-201ENST00000524791 560 ntBASIC15.93■□□□□ 0.14
NUP43Q8NFH3 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.93■□□□□ 0.14
NUP43Q8NFH3 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.93■□□□□ 0.14
NUP43Q8NFH3 AC021087.4-201ENST00000563761 564 ntBASIC15.93■□□□□ 0.14
NUP43Q8NFH3 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
NUP43Q8NFH3 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.93■□□□□ 0.14
NUP43Q8NFH3 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NUP43Q8NFH3 TERC-201ENST00000602385 541 ntBASIC15.93■□□□□ 0.14
NUP43Q8NFH3 AC004706.3-202ENST00000621574 984 ntBASIC15.93■□□□□ 0.14
NUP43Q8NFH3 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.93■□□□□ 0.14
NUP43Q8NFH3 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NUP43Q8NFH3 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
NUP43Q8NFH3 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
NUP43Q8NFH3 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.93■□□□□ 0.14
NUP43Q8NFH3 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NUP43Q8NFH3 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NUP43Q8NFH3 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NUP43Q8NFH3 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.93■□□□□ 0.14
NUP43Q8NFH3 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NUP43Q8NFH3 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NUP43Q8NFH3 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NUP43Q8NFH3 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
NUP43Q8NFH3 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
NUP43Q8NFH3 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NUP43Q8NFH3 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NUP43Q8NFH3 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.92■□□□□ 0.14
NUP43Q8NFH3 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NUP43Q8NFH3 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NUP43Q8NFH3 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NUP43Q8NFH3 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NUP43Q8NFH3 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NUP43Q8NFH3 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NUP43Q8NFH3 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.92■□□□□ 0.14
NUP43Q8NFH3 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.92■□□□□ 0.14
NUP43Q8NFH3 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.92■□□□□ 0.14
NUP43Q8NFH3 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NUP43Q8NFH3 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NUP43Q8NFH3 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NUP43Q8NFH3 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
NUP43Q8NFH3 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
NUP43Q8NFH3 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NUP43Q8NFH3 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.92■□□□□ 0.14
NUP43Q8NFH3 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NUP43Q8NFH3 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.92■□□□□ 0.14
NUP43Q8NFH3 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NUP43Q8NFH3 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
NUP43Q8NFH3 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.92■□□□□ 0.14
NUP43Q8NFH3 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.92■□□□□ 0.14
NUP43Q8NFH3 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
NUP43Q8NFH3 UNC93B7-201ENST00000509439 705 ntBASIC15.92■□□□□ 0.14
NUP43Q8NFH3 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.92■□□□□ 0.14
NUP43Q8NFH3 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.92■□□□□ 0.14
NUP43Q8NFH3 DUX4L17-201ENST00000557360 1267 ntBASIC15.92■□□□□ 0.14
NUP43Q8NFH3 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.92■□□□□ 0.14
NUP43Q8NFH3 AC025062.2-201ENST00000605477 670 ntBASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms