Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDRT4Q8N9R6 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDRT4Q8N9R6 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.81■□□□□ 0.12
CDRT4Q8N9R6 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDRT4Q8N9R6 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDRT4Q8N9R6 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.81■□□□□ 0.12
CDRT4Q8N9R6 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDRT4Q8N9R6 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDRT4Q8N9R6 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDRT4Q8N9R6 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CDRT4Q8N9R6 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.81■□□□□ 0.12
CDRT4Q8N9R6 KRT18P27-201ENST00000427733 1299 ntBASIC15.81■□□□□ 0.12
CDRT4Q8N9R6 KRT18P67-201ENST00000432816 1264 ntBASIC15.81■□□□□ 0.12
CDRT4Q8N9R6 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
CDRT4Q8N9R6 AC018712.1-201ENST00000455767 687 ntBASIC15.81■□□□□ 0.12
CDRT4Q8N9R6 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.81■□□□□ 0.12
CDRT4Q8N9R6 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDRT4Q8N9R6 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDRT4Q8N9R6 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.81■□□□□ 0.12
CDRT4Q8N9R6 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.81■□□□□ 0.12
CDRT4Q8N9R6 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.81■□□□□ 0.12
CDRT4Q8N9R6 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDRT4Q8N9R6 PI4KAP1-204ENST00000612579 1703 ntBASIC15.81■□□□□ 0.12
CDRT4Q8N9R6 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.81■□□□□ 0.12
CDRT4Q8N9R6 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
CDRT4Q8N9R6 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.81■□□□□ 0.12
CDRT4Q8N9R6 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDRT4Q8N9R6 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDRT4Q8N9R6 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CDRT4Q8N9R6 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 AC078925.2-201ENST00000624013 1973 ntBASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 AC136632.2-201ENST00000512891 861 ntBASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 KRT126P-201ENST00000549467 1181 ntBASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 AC008735.5-201ENST00000623544 497 ntBASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 CROCCP1-201ENST00000426910 5675 ntBASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDRT4Q8N9R6 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDRT4Q8N9R6 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDRT4Q8N9R6 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDRT4Q8N9R6 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDRT4Q8N9R6 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDRT4Q8N9R6 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDRT4Q8N9R6 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CDRT4Q8N9R6 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CDRT4Q8N9R6 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
CDRT4Q8N9R6 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDRT4Q8N9R6 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDRT4Q8N9R6 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDRT4Q8N9R6 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
CDRT4Q8N9R6 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms