Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDH20Q8N6Y1 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH20Q8N6Y1 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH20Q8N6Y1 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
PCDH20Q8N6Y1 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDH20Q8N6Y1 MIR940-201ENST00000401276 94 ntBASIC17.41■□□□□ 0.38
PCDH20Q8N6Y1 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.41■□□□□ 0.38
PCDH20Q8N6Y1 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.41■□□□□ 0.38
PCDH20Q8N6Y1 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDH20Q8N6Y1 VN2R19P-201ENST00000442399 1052 ntBASIC17.41■□□□□ 0.38
PCDH20Q8N6Y1 KRT18P3-201ENST00000451602 1288 ntBASIC17.41■□□□□ 0.38
PCDH20Q8N6Y1 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.41■□□□□ 0.38
PCDH20Q8N6Y1 RNA5SP416-201ENST00000516838 111 ntBASIC17.41■□□□□ 0.38
PCDH20Q8N6Y1 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.41■□□□□ 0.38
PCDH20Q8N6Y1 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH20Q8N6Y1 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.41■□□□□ 0.38
PCDH20Q8N6Y1 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.41■□□□□ 0.38
PCDH20Q8N6Y1 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH20Q8N6Y1 PMS2P7-201ENST00000506558 1336 ntBASIC17.41■□□□□ 0.38
PCDH20Q8N6Y1 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
PCDH20Q8N6Y1 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH20Q8N6Y1 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.41■□□□□ 0.38
PCDH20Q8N6Y1 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH20Q8N6Y1 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
PCDH20Q8N6Y1 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH20Q8N6Y1 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDH20Q8N6Y1 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH20Q8N6Y1 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PCDH20Q8N6Y1 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH20Q8N6Y1 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH20Q8N6Y1 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH20Q8N6Y1 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH20Q8N6Y1 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDH20Q8N6Y1 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH20Q8N6Y1 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDH20Q8N6Y1 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH20Q8N6Y1 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
PCDH20Q8N6Y1 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.4■□□□□ 0.38
PCDH20Q8N6Y1 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDH20Q8N6Y1 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDH20Q8N6Y1 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH20Q8N6Y1 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDH20Q8N6Y1 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH20Q8N6Y1 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH20Q8N6Y1 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
PCDH20Q8N6Y1 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH20Q8N6Y1 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.4■□□□□ 0.38
PCDH20Q8N6Y1 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
PCDH20Q8N6Y1 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PCDH20Q8N6Y1 AC007967.2-201ENST00000432613 625 ntBASIC17.4■□□□□ 0.38
PCDH20Q8N6Y1 PAWRP1-201ENST00000451083 565 ntBASIC17.4■□□□□ 0.38
PCDH20Q8N6Y1 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.4■□□□□ 0.38
PCDH20Q8N6Y1 AC064836.3-201ENST00000607928 673 ntBASIC17.4■□□□□ 0.38
PCDH20Q8N6Y1 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH20Q8N6Y1 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH20Q8N6Y1 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH20Q8N6Y1 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH20Q8N6Y1 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDH20Q8N6Y1 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDH20Q8N6Y1 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH20Q8N6Y1 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PCDH20Q8N6Y1 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH20Q8N6Y1 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.38
PCDH20Q8N6Y1 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PCDH20Q8N6Y1 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
PCDH20Q8N6Y1 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDH20Q8N6Y1 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH20Q8N6Y1 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDH20Q8N6Y1 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH20Q8N6Y1 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.39■□□□□ 0.37
PCDH20Q8N6Y1 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH20Q8N6Y1 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH20Q8N6Y1 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
PCDH20Q8N6Y1 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
PCDH20Q8N6Y1 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.39■□□□□ 0.37
PCDH20Q8N6Y1 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
PCDH20Q8N6Y1 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.39■□□□□ 0.37
PCDH20Q8N6Y1 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.39■□□□□ 0.37
PCDH20Q8N6Y1 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PCDH20Q8N6Y1 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDH20Q8N6Y1 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH20Q8N6Y1 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PCDH20Q8N6Y1 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH20Q8N6Y1 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.39■□□□□ 0.37
PCDH20Q8N6Y1 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH20Q8N6Y1 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH20Q8N6Y1 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.39■□□□□ 0.37
PCDH20Q8N6Y1 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PCDH20Q8N6Y1 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH20Q8N6Y1 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PCDH20Q8N6Y1 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDH20Q8N6Y1 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH20Q8N6Y1 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH20Q8N6Y1 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH20Q8N6Y1 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PCDH20Q8N6Y1 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH20Q8N6Y1 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH20Q8N6Y1 EGFEM1P-202ENST00000431685 1563 ntBASIC17.38■□□□□ 0.37
PCDH20Q8N6Y1 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH20Q8N6Y1 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms