Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAI1Q7Z5J4 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC14.41□□□□□ -0.1
RAI1Q7Z5J4 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
RAI1Q7Z5J4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAI1Q7Z5J4 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
RAI1Q7Z5J4 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAI1Q7Z5J4 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAI1Q7Z5J4 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAI1Q7Z5J4 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAI1Q7Z5J4 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAI1Q7Z5J4 HCG4-201ENST00000418983 998 ntBASIC14.41□□□□□ -0.1
RAI1Q7Z5J4 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.41□□□□□ -0.1
RAI1Q7Z5J4 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAI1Q7Z5J4 UGT1A2P-201ENST00000454886 866 ntBASIC14.41□□□□□ -0.1
RAI1Q7Z5J4 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
RAI1Q7Z5J4 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.41□□□□□ -0.1
RAI1Q7Z5J4 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.41□□□□□ -0.1
RAI1Q7Z5J4 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.41□□□□□ -0.1
RAI1Q7Z5J4 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.41□□□□□ -0.1
RAI1Q7Z5J4 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.41□□□□□ -0.1
RAI1Q7Z5J4 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.41□□□□□ -0.1
RAI1Q7Z5J4 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAI1Q7Z5J4 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.41□□□□□ -0.1
RAI1Q7Z5J4 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.41□□□□□ -0.1
RAI1Q7Z5J4 AC239800.4-201ENST00000603712 296 ntBASIC14.41□□□□□ -0.1
RAI1Q7Z5J4 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAI1Q7Z5J4 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAI1Q7Z5J4 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAI1Q7Z5J4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC14.4□□□□□ -0.1
RAI1Q7Z5J4 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAI1Q7Z5J4 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
RAI1Q7Z5J4 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
RAI1Q7Z5J4 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAI1Q7Z5J4 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAI1Q7Z5J4 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAI1Q7Z5J4 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAI1Q7Z5J4 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
RAI1Q7Z5J4 AC008677.1-201ENST00000519230 1561 ntBASIC14.4□□□□□ -0.1
RAI1Q7Z5J4 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.4□□□□□ -0.1
RAI1Q7Z5J4 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
RAI1Q7Z5J4 FZD10-202ENST00000539839 3282 ntBASIC14.4□□□□□ -0.1
RAI1Q7Z5J4 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
RAI1Q7Z5J4 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAI1Q7Z5J4 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
RAI1Q7Z5J4 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAI1Q7Z5J4 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.4□□□□□ -0.1
RAI1Q7Z5J4 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.4□□□□□ -0.1
RAI1Q7Z5J4 AL671277.1-201ENST00000429656 993 ntBASIC14.4□□□□□ -0.1
RAI1Q7Z5J4 AC005237.2-201ENST00000434368 219 ntBASIC14.4□□□□□ -0.1
RAI1Q7Z5J4 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAI1Q7Z5J4 FAM207CP-201ENST00000443486 507 ntBASIC14.4□□□□□ -0.1
RAI1Q7Z5J4 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
RAI1Q7Z5J4 SLC25A39P2-201ENST00000537614 270 ntBASIC14.4□□□□□ -0.1
RAI1Q7Z5J4 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.4□□□□□ -0.1
RAI1Q7Z5J4 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAI1Q7Z5J4 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.4□□□□□ -0.1
RAI1Q7Z5J4 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
RAI1Q7Z5J4 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAI1Q7Z5J4 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAI1Q7Z5J4 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.4□□□□□ -0.1
RAI1Q7Z5J4 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAI1Q7Z5J4 AC012569.1-201ENST00000591191 1524 ntBASIC14.4□□□□□ -0.1
RAI1Q7Z5J4 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAI1Q7Z5J4 EGFEM1P-202ENST00000431685 1563 ntBASIC14.4□□□□□ -0.1
RAI1Q7Z5J4 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAI1Q7Z5J4 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
RAI1Q7Z5J4 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAI1Q7Z5J4 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
RAI1Q7Z5J4 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
RAI1Q7Z5J4 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAI1Q7Z5J4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAI1Q7Z5J4 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAI1Q7Z5J4 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAI1Q7Z5J4 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAI1Q7Z5J4 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAI1Q7Z5J4 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAI1Q7Z5J4 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.39□□□□□ -0.11
RAI1Q7Z5J4 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.39□□□□□ -0.11
RAI1Q7Z5J4 AC093525.9-201ENST00000624961 1746 ntBASIC14.39□□□□□ -0.11
RAI1Q7Z5J4 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAI1Q7Z5J4 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAI1Q7Z5J4 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAI1Q7Z5J4 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.39□□□□□ -0.11
RAI1Q7Z5J4 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.39□□□□□ -0.11
RAI1Q7Z5J4 MRPS18AP1-201ENST00000414458 589 ntBASIC14.39□□□□□ -0.11
RAI1Q7Z5J4 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAI1Q7Z5J4 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.39□□□□□ -0.11
RAI1Q7Z5J4 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.39□□□□□ -0.11
RAI1Q7Z5J4 AC069120.2-201ENST00000524091 540 ntBASIC14.39□□□□□ -0.11
RAI1Q7Z5J4 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAI1Q7Z5J4 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
RAI1Q7Z5J4 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.39□□□□□ -0.11
RAI1Q7Z5J4 AC060834.1-201ENST00000443027 2032 ntBASIC14.39□□□□□ -0.11
RAI1Q7Z5J4 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAI1Q7Z5J4 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAI1Q7Z5J4 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC14.39□□□□□ -0.11
RAI1Q7Z5J4 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAI1Q7Z5J4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
RAI1Q7Z5J4 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
RAI1Q7Z5J4 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms