Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CCDC141Q6ZP82 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CCDC141Q6ZP82 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
CCDC141Q6ZP82 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CCDC141Q6ZP82 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC25.05■■□□□ 1.6
CCDC141Q6ZP82 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
CCDC141Q6ZP82 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC25.05■■□□□ 1.6
CCDC141Q6ZP82 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC25.05■■□□□ 1.6
CCDC141Q6ZP82 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC25.05■■□□□ 1.6
CCDC141Q6ZP82 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC25.05■■□□□ 1.6
CCDC141Q6ZP82 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC25.05■■□□□ 1.6
CCDC141Q6ZP82 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CCDC141Q6ZP82 REEP4-207ENST00000523293 913 ntTSL 3 BASIC25.05■■□□□ 1.6
CCDC141Q6ZP82 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC25.05■■□□□ 1.6
CCDC141Q6ZP82 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC25.05■■□□□ 1.6
CCDC141Q6ZP82 AC004790.1-201ENST00000612686 536 ntBASIC25.05■■□□□ 1.6
CCDC141Q6ZP82 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CCDC141Q6ZP82 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CCDC141Q6ZP82 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CCDC141Q6ZP82 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC25.05■■□□□ 1.6
CCDC141Q6ZP82 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
CCDC141Q6ZP82 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CCDC141Q6ZP82 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CCDC141Q6ZP82 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CCDC141Q6ZP82 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC25.05■■□□□ 1.6
CCDC141Q6ZP82 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC25.04■■□□□ 1.6
CCDC141Q6ZP82 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC25.04■■□□□ 1.6
CCDC141Q6ZP82 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CCDC141Q6ZP82 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CCDC141Q6ZP82 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CCDC141Q6ZP82 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CCDC141Q6ZP82 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC25.04■■□□□ 1.6
CCDC141Q6ZP82 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CCDC141Q6ZP82 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC25.04■■□□□ 1.6
CCDC141Q6ZP82 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC25.04■■□□□ 1.6
CCDC141Q6ZP82 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC25.04■■□□□ 1.6
CCDC141Q6ZP82 AL133215.2-201ENST00000609242 977 ntBASIC25.04■■□□□ 1.6
CCDC141Q6ZP82 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CCDC141Q6ZP82 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
CCDC141Q6ZP82 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
CCDC141Q6ZP82 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC25.04■■□□□ 1.6
CCDC141Q6ZP82 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CCDC141Q6ZP82 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CCDC141Q6ZP82 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CCDC141Q6ZP82 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CCDC141Q6ZP82 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CCDC141Q6ZP82 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC25.04■■□□□ 1.6
CCDC141Q6ZP82 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CCDC141Q6ZP82 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
CCDC141Q6ZP82 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CCDC141Q6ZP82 CETN4P-206ENST00000642099 2168 ntBASIC25.04■■□□□ 1.6
CCDC141Q6ZP82 RHBDF1P1-201ENST00000427504 1941 ntBASIC25.04■■□□□ 1.6
CCDC141Q6ZP82 GOLGA2P9-201ENST00000596977 1937 ntBASIC25.04■■□□□ 1.6
CCDC141Q6ZP82 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CCDC141Q6ZP82 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
CCDC141Q6ZP82 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
CCDC141Q6ZP82 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC25.03■■□□□ 1.6
CCDC141Q6ZP82 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC25.03■■□□□ 1.6
CCDC141Q6ZP82 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC25.03■■□□□ 1.6
CCDC141Q6ZP82 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC25.03■■□□□ 1.6
CCDC141Q6ZP82 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC25.03■■□□□ 1.6
CCDC141Q6ZP82 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
CCDC141Q6ZP82 ZNF890P-202ENST00000530367 1156 ntBASIC25.03■■□□□ 1.6
CCDC141Q6ZP82 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CCDC141Q6ZP82 CR383656.12-201ENST00000549567 513 ntBASIC25.03■■□□□ 1.6
CCDC141Q6ZP82 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC25.03■■□□□ 1.6
CCDC141Q6ZP82 AC009407.1-201ENST00000568958 598 ntBASIC25.03■■□□□ 1.6
CCDC141Q6ZP82 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC25.03■■□□□ 1.6
CCDC141Q6ZP82 LITAF-210ENST00000571976 548 ntTSL 2 BASIC25.03■■□□□ 1.6
CCDC141Q6ZP82 LITAF-214ENST00000574703 486 ntTSL 2 BASIC25.03■■□□□ 1.6
CCDC141Q6ZP82 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
CCDC141Q6ZP82 AL132655.2-201ENST00000596276 594 ntBASIC25.03■■□□□ 1.6
CCDC141Q6ZP82 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC25.03■■□□□ 1.6
CCDC141Q6ZP82 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC25.03■■□□□ 1.6
CCDC141Q6ZP82 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CCDC141Q6ZP82 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC25.03■■□□□ 1.6
CCDC141Q6ZP82 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC25.03■■□□□ 1.6
CCDC141Q6ZP82 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CCDC141Q6ZP82 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CCDC141Q6ZP82 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC25.03■■□□□ 1.6
CCDC141Q6ZP82 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CCDC141Q6ZP82 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CCDC141Q6ZP82 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CCDC141Q6ZP82 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC25.03■■□□□ 1.6
CCDC141Q6ZP82 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CCDC141Q6ZP82 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC25.03■■□□□ 1.6
CCDC141Q6ZP82 GK-202ENST00000378941 458 ntTSL 3 BASIC25.02■■□□□ 1.6
CCDC141Q6ZP82 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CCDC141Q6ZP82 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
CCDC141Q6ZP82 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC25.02■■□□□ 1.6
CCDC141Q6ZP82 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC25.02■■□□□ 1.6
CCDC141Q6ZP82 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC25.02■■□□□ 1.6
CCDC141Q6ZP82 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC25.02■■□□□ 1.6
CCDC141Q6ZP82 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC25.02■■□□□ 1.6
CCDC141Q6ZP82 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC25.02■■□□□ 1.6
CCDC141Q6ZP82 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC25.02■■□□□ 1.6
CCDC141Q6ZP82 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC25.02■■□□□ 1.6
CCDC141Q6ZP82 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC25.02■■□□□ 1.6
CCDC141Q6ZP82 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CCDC141Q6ZP82 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms