Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CASC4Q6P4E1 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CASC4Q6P4E1 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CASC4Q6P4E1 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CASC4Q6P4E1 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.41■□□□□ 0.38
CASC4Q6P4E1 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CASC4Q6P4E1 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.41■□□□□ 0.38
CASC4Q6P4E1 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CASC4Q6P4E1 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CASC4Q6P4E1 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.41■□□□□ 0.38
CASC4Q6P4E1 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CASC4Q6P4E1 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CASC4Q6P4E1 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CASC4Q6P4E1 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CASC4Q6P4E1 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CASC4Q6P4E1 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CASC4Q6P4E1 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CASC4Q6P4E1 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CASC4Q6P4E1 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CASC4Q6P4E1 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CASC4Q6P4E1 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CASC4Q6P4E1 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CASC4Q6P4E1 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.41■□□□□ 0.38
CASC4Q6P4E1 AC104819.1-201ENST00000504587 486 ntBASIC17.41■□□□□ 0.38
CASC4Q6P4E1 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CASC4Q6P4E1 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CASC4Q6P4E1 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CASC4Q6P4E1 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CASC4Q6P4E1 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CASC4Q6P4E1 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.41■□□□□ 0.38
CASC4Q6P4E1 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CASC4Q6P4E1 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CASC4Q6P4E1 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CASC4Q6P4E1 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASC4Q6P4E1 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASC4Q6P4E1 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASC4Q6P4E1 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CASC4Q6P4E1 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASC4Q6P4E1 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.4■□□□□ 0.38
CASC4Q6P4E1 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CASC4Q6P4E1 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CASC4Q6P4E1 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASC4Q6P4E1 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CASC4Q6P4E1 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASC4Q6P4E1 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASC4Q6P4E1 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.4■□□□□ 0.38
CASC4Q6P4E1 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASC4Q6P4E1 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.4■□□□□ 0.38
CASC4Q6P4E1 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.4■□□□□ 0.38
CASC4Q6P4E1 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.4■□□□□ 0.38
CASC4Q6P4E1 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASC4Q6P4E1 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.4■□□□□ 0.38
CASC4Q6P4E1 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.4■□□□□ 0.38
CASC4Q6P4E1 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.4■□□□□ 0.38
CASC4Q6P4E1 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.4■□□□□ 0.38
CASC4Q6P4E1 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
CASC4Q6P4E1 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.4■□□□□ 0.38
CASC4Q6P4E1 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.4■□□□□ 0.38
CASC4Q6P4E1 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASC4Q6P4E1 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CASC4Q6P4E1 AP000550.4-202ENST00000639755 178 ntBASIC17.4■□□□□ 0.38
CASC4Q6P4E1 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CASC4Q6P4E1 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASC4Q6P4E1 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASC4Q6P4E1 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CASC4Q6P4E1 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CASC4Q6P4E1 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.4■□□□□ 0.38
CASC4Q6P4E1 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CASC4Q6P4E1 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASC4Q6P4E1 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASC4Q6P4E1 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASC4Q6P4E1 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.4■□□□□ 0.38
CASC4Q6P4E1 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASC4Q6P4E1 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.4■□□□□ 0.38
CASC4Q6P4E1 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASC4Q6P4E1 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.4■□□□□ 0.38
CASC4Q6P4E1 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CASC4Q6P4E1 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.39■□□□□ 0.38
CASC4Q6P4E1 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CASC4Q6P4E1 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CASC4Q6P4E1 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.39■□□□□ 0.37
CASC4Q6P4E1 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.39■□□□□ 0.37
CASC4Q6P4E1 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CASC4Q6P4E1 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.39■□□□□ 0.37
CASC4Q6P4E1 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CASC4Q6P4E1 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CASC4Q6P4E1 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CASC4Q6P4E1 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.39■□□□□ 0.37
CASC4Q6P4E1 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.39■□□□□ 0.37
CASC4Q6P4E1 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
CASC4Q6P4E1 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.39■□□□□ 0.37
CASC4Q6P4E1 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.39■□□□□ 0.37
CASC4Q6P4E1 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.39■□□□□ 0.37
CASC4Q6P4E1 AC069148.1-201ENST00000608741 768 ntBASIC17.39■□□□□ 0.37
CASC4Q6P4E1 AC114341.1-201ENST00000618070 349 ntBASIC17.39■□□□□ 0.37
CASC4Q6P4E1 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.39■□□□□ 0.37
CASC4Q6P4E1 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
CASC4Q6P4E1 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CASC4Q6P4E1 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CASC4Q6P4E1 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms