Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM53Q6P2H8 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM53Q6P2H8 AL009178.2-201ENST00000597278 2719 ntBASIC15.7■□□□□ 0.1
TMEM53Q6P2H8 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.7■□□□□ 0.1
TMEM53Q6P2H8 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM53Q6P2H8 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TMEM53Q6P2H8 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.7■□□□□ 0.1
TMEM53Q6P2H8 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM53Q6P2H8 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM53Q6P2H8 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TMEM53Q6P2H8 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.7■□□□□ 0.1
TMEM53Q6P2H8 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.7■□□□□ 0.1
TMEM53Q6P2H8 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.69■□□□□ 0.1
TMEM53Q6P2H8 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.69■□□□□ 0.1
TMEM53Q6P2H8 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMEM53Q6P2H8 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.69■□□□□ 0.1
TMEM53Q6P2H8 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.69■□□□□ 0.1
TMEM53Q6P2H8 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TMEM53Q6P2H8 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TMEM53Q6P2H8 FAM45BP-202ENST00000592932 1624 ntBASIC15.69■□□□□ 0.1
TMEM53Q6P2H8 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMEM53Q6P2H8 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TMEM53Q6P2H8 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TMEM53Q6P2H8 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMEM53Q6P2H8 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMEM53Q6P2H8 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMEM53Q6P2H8 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TMEM53Q6P2H8 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.69■□□□□ 0.1
TMEM53Q6P2H8 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.69■□□□□ 0.1
TMEM53Q6P2H8 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
TMEM53Q6P2H8 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TMEM53Q6P2H8 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.69■□□□□ 0.1
TMEM53Q6P2H8 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TMEM53Q6P2H8 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMEM53Q6P2H8 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TMEM53Q6P2H8 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.69■□□□□ 0.1
TMEM53Q6P2H8 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMEM53Q6P2H8 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMEM53Q6P2H8 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.69■□□□□ 0.1
TMEM53Q6P2H8 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TMEM53Q6P2H8 PKD1P5-201ENST00000532415 10291 ntBASIC15.69■□□□□ 0.1
TMEM53Q6P2H8 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMEM53Q6P2H8 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.69■□□□□ 0.1
TMEM53Q6P2H8 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TMEM53Q6P2H8 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM53Q6P2H8 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM53Q6P2H8 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM53Q6P2H8 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM53Q6P2H8 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.68■□□□□ 0.1
TMEM53Q6P2H8 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM53Q6P2H8 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.68■□□□□ 0.1
TMEM53Q6P2H8 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM53Q6P2H8 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM53Q6P2H8 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM53Q6P2H8 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM53Q6P2H8 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM53Q6P2H8 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM53Q6P2H8 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM53Q6P2H8 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.68■□□□□ 0.1
TMEM53Q6P2H8 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
TMEM53Q6P2H8 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM53Q6P2H8 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM53Q6P2H8 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.68■□□□□ 0.1
TMEM53Q6P2H8 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.68■□□□□ 0.1
TMEM53Q6P2H8 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.68■□□□□ 0.1
TMEM53Q6P2H8 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.68■□□□□ 0.1
TMEM53Q6P2H8 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TMEM53Q6P2H8 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.68■□□□□ 0.1
TMEM53Q6P2H8 AL358472.4-201ENST00000633140 710 ntBASIC15.68■□□□□ 0.1
TMEM53Q6P2H8 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.68■□□□□ 0.1
TMEM53Q6P2H8 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.68■□□□□ 0.1
TMEM53Q6P2H8 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM53Q6P2H8 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.68■□□□□ 0.1
TMEM53Q6P2H8 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM53Q6P2H8 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM53Q6P2H8 AC092384.3-202ENST00000564646 2873 ntBASIC15.68■□□□□ 0.1
TMEM53Q6P2H8 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM53Q6P2H8 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM53Q6P2H8 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.68■□□□□ 0.1
TMEM53Q6P2H8 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM53Q6P2H8 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM53Q6P2H8 KRT18P55-202ENST00000578578 1546 ntBASIC15.68■□□□□ 0.1
TMEM53Q6P2H8 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM53Q6P2H8 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM53Q6P2H8 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.68■□□□□ 0.1
TMEM53Q6P2H8 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM53Q6P2H8 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEM53Q6P2H8 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
TMEM53Q6P2H8 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TMEM53Q6P2H8 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TMEM53Q6P2H8 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TMEM53Q6P2H8 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
TMEM53Q6P2H8 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.67■□□□□ 0.1
TMEM53Q6P2H8 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TMEM53Q6P2H8 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TMEM53Q6P2H8 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TMEM53Q6P2H8 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TMEM53Q6P2H8 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TMEM53Q6P2H8 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
TMEM53Q6P2H8 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms