Protein–RNA interactions for Protein: Q6NT52

CGB2, Choriogonadotropin subunit beta variant 2, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB2Q6NT52 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CGB2Q6NT52 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CGB2Q6NT52 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CGB2Q6NT52 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CGB2Q6NT52 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.69■□□□□ 0.26
CGB2Q6NT52 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CGB2Q6NT52 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CGB2Q6NT52 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CGB2Q6NT52 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.69■□□□□ 0.26
CGB2Q6NT52 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CGB2Q6NT52 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CGB2Q6NT52 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
CGB2Q6NT52 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CGB2Q6NT52 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CGB2Q6NT52 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.69■□□□□ 0.26
CGB2Q6NT52 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CGB2Q6NT52 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CGB2Q6NT52 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CGB2Q6NT52 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CGB2Q6NT52 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.68■□□□□ 0.26
CGB2Q6NT52 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CGB2Q6NT52 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
CGB2Q6NT52 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CGB2Q6NT52 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CGB2Q6NT52 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CGB2Q6NT52 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
CGB2Q6NT52 PRORSD1P-201ENST00000295112 541 ntBASIC16.68■□□□□ 0.26
CGB2Q6NT52 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CGB2Q6NT52 HMGA1P5-201ENST00000412453 271 ntBASIC16.68■□□□□ 0.26
CGB2Q6NT52 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CGB2Q6NT52 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.68■□□□□ 0.26
CGB2Q6NT52 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CGB2Q6NT52 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.68■□□□□ 0.26
CGB2Q6NT52 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.68■□□□□ 0.26
CGB2Q6NT52 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CGB2Q6NT52 AC092666.2-201ENST00000613287 246 ntBASIC16.68■□□□□ 0.26
CGB2Q6NT52 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CGB2Q6NT52 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CGB2Q6NT52 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CGB2Q6NT52 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.68■□□□□ 0.26
CGB2Q6NT52 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CGB2Q6NT52 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CGB2Q6NT52 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CGB2Q6NT52 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CGB2Q6NT52 AC009336.1-201ENST00000608941 1553 ntBASIC16.68■□□□□ 0.26
CGB2Q6NT52 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CGB2Q6NT52 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CGB2Q6NT52 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CGB2Q6NT52 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CGB2Q6NT52 GGT4P-201ENST00000623672 1708 ntBASIC16.67■□□□□ 0.26
CGB2Q6NT52 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CGB2Q6NT52 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CGB2Q6NT52 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.67■□□□□ 0.26
CGB2Q6NT52 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CGB2Q6NT52 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CGB2Q6NT52 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.67■□□□□ 0.26
CGB2Q6NT52 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CGB2Q6NT52 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CGB2Q6NT52 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CGB2Q6NT52 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CGB2Q6NT52 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CGB2Q6NT52 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CGB2Q6NT52 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.67■□□□□ 0.26
CGB2Q6NT52 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
CGB2Q6NT52 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.67■□□□□ 0.26
CGB2Q6NT52 TSPY7P-201ENST00000431358 1114 ntBASIC16.67■□□□□ 0.26
CGB2Q6NT52 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.67■□□□□ 0.26
CGB2Q6NT52 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.67■□□□□ 0.26
CGB2Q6NT52 AC122714.2-201ENST00000502787 707 ntBASIC16.67■□□□□ 0.26
CGB2Q6NT52 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CGB2Q6NT52 CD99P1-205ENST00000527459 561 ntBASIC16.67■□□□□ 0.26
CGB2Q6NT52 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CGB2Q6NT52 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.67■□□□□ 0.26
CGB2Q6NT52 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.67■□□□□ 0.26
CGB2Q6NT52 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.67■□□□□ 0.26
CGB2Q6NT52 AC142381.4-202ENST00000563973 229 ntBASIC16.67■□□□□ 0.26
CGB2Q6NT52 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
CGB2Q6NT52 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.67■□□□□ 0.26
CGB2Q6NT52 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.67■□□□□ 0.26
CGB2Q6NT52 ITM2C-210ENST00000620962 501 ntBASIC16.67■□□□□ 0.26
CGB2Q6NT52 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CGB2Q6NT52 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CGB2Q6NT52 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.67■□□□□ 0.26
CGB2Q6NT52 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.67■□□□□ 0.26
CGB2Q6NT52 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CGB2Q6NT52 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CGB2Q6NT52 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CGB2Q6NT52 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CGB2Q6NT52 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CGB2Q6NT52 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.67■□□□□ 0.26
CGB2Q6NT52 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CGB2Q6NT52 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CGB2Q6NT52 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CGB2Q6NT52 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CGB2Q6NT52 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.67■□□□□ 0.26
CGB2Q6NT52 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
CGB2Q6NT52 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CGB2Q6NT52 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CGB2Q6NT52 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
CGB2Q6NT52 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms