Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
RIF1Q5UIP0 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.32■□□□□ 0.2
RIF1Q5UIP0 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.32■□□□□ 0.2
RIF1Q5UIP0 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RIF1Q5UIP0 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
RIF1Q5UIP0 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.32■□□□□ 0.2
RIF1Q5UIP0 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RIF1Q5UIP0 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RIF1Q5UIP0 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.32■□□□□ 0.2
RIF1Q5UIP0 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RIF1Q5UIP0 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.32■□□□□ 0.2
RIF1Q5UIP0 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.32■□□□□ 0.2
RIF1Q5UIP0 AC233724.13-201ENST00000598383 410 ntBASIC16.32■□□□□ 0.2
RIF1Q5UIP0 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC16.32■□□□□ 0.2
RIF1Q5UIP0 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RIF1Q5UIP0 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RIF1Q5UIP0 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.32■□□□□ 0.2
RIF1Q5UIP0 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RIF1Q5UIP0 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RIF1Q5UIP0 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RIF1Q5UIP0 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC16.32■□□□□ 0.2
RIF1Q5UIP0 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
RIF1Q5UIP0 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RIF1Q5UIP0 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RIF1Q5UIP0 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RIF1Q5UIP0 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.31■□□□□ 0.2
RIF1Q5UIP0 FOXO1B-201ENST00000504678 1527 ntBASIC16.31■□□□□ 0.2
RIF1Q5UIP0 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
RIF1Q5UIP0 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.31■□□□□ 0.2
RIF1Q5UIP0 PFN1P12-201ENST00000455938 534 ntBASIC16.31■□□□□ 0.2
RIF1Q5UIP0 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC16.31■□□□□ 0.2
RIF1Q5UIP0 AC093726.1-201ENST00000608064 963 ntBASIC16.31■□□□□ 0.2
RIF1Q5UIP0 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RIF1Q5UIP0 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RIF1Q5UIP0 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RIF1Q5UIP0 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RIF1Q5UIP0 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.31■□□□□ 0.2
RIF1Q5UIP0 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.31■□□□□ 0.2
RIF1Q5UIP0 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.31■□□□□ 0.2
RIF1Q5UIP0 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RIF1Q5UIP0 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RIF1Q5UIP0 AGER-203ENST00000375065 665 ntTSL 2 BASIC16.31■□□□□ 0.2
RIF1Q5UIP0 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RIF1Q5UIP0 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC16.31■□□□□ 0.2
RIF1Q5UIP0 KRT18P34-201ENST00000488218 1270 ntBASIC16.31■□□□□ 0.2
RIF1Q5UIP0 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.31■□□□□ 0.2
RIF1Q5UIP0 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC16.31■□□□□ 0.2
RIF1Q5UIP0 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RIF1Q5UIP0 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC16.31■□□□□ 0.2
RIF1Q5UIP0 AC092978.1-202ENST00000637590 1327 ntBASIC16.31■□□□□ 0.2
RIF1Q5UIP0 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.31■□□□□ 0.2
RIF1Q5UIP0 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RIF1Q5UIP0 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RIF1Q5UIP0 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RIF1Q5UIP0 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RIF1Q5UIP0 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.3■□□□□ 0.2
RIF1Q5UIP0 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.3■□□□□ 0.2
RIF1Q5UIP0 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RIF1Q5UIP0 AL512361.1-201ENST00000554200 418 ntBASIC16.3■□□□□ 0.2
RIF1Q5UIP0 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC16.3■□□□□ 0.2
RIF1Q5UIP0 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RIF1Q5UIP0 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.3■□□□□ 0.2
RIF1Q5UIP0 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.3■□□□□ 0.2
RIF1Q5UIP0 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RIF1Q5UIP0 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RIF1Q5UIP0 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.3■□□□□ 0.2
RIF1Q5UIP0 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RIF1Q5UIP0 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RIF1Q5UIP0 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
RIF1Q5UIP0 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RIF1Q5UIP0 AL020996.1-203ENST00000536896 2307 ntBASIC16.3■□□□□ 0.2
RIF1Q5UIP0 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RIF1Q5UIP0 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RIF1Q5UIP0 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RIF1Q5UIP0 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.3■□□□□ 0.2
RIF1Q5UIP0 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RIF1Q5UIP0 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC16.3■□□□□ 0.2
RIF1Q5UIP0 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC16.3■□□□□ 0.2
RIF1Q5UIP0 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RIF1Q5UIP0 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC16.3■□□□□ 0.2
RIF1Q5UIP0 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RIF1Q5UIP0 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RIF1Q5UIP0 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RIF1Q5UIP0 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RIF1Q5UIP0 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RIF1Q5UIP0 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RIF1Q5UIP0 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RIF1Q5UIP0 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.29■□□□□ 0.2
RIF1Q5UIP0 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC16.29■□□□□ 0.2
RIF1Q5UIP0 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.29■□□□□ 0.2
RIF1Q5UIP0 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.29■□□□□ 0.2
RIF1Q5UIP0 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RIF1Q5UIP0 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RIF1Q5UIP0 CDC14C-201ENST00000428251 1719 ntBASIC16.29■□□□□ 0.2
RIF1Q5UIP0 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RIF1Q5UIP0 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RIF1Q5UIP0 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RIF1Q5UIP0 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.29■□□□□ 0.2
RIF1Q5UIP0 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RIF1Q5UIP0 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms