Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 MIR346-201ENST00000362234 95 ntBASIC20.26■□□□□ 0.83
PDS5AQ29RF7 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PDS5AQ29RF7 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
PDS5AQ29RF7 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC20.26■□□□□ 0.83
PDS5AQ29RF7 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PDS5AQ29RF7 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PDS5AQ29RF7 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
PDS5AQ29RF7 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC20.26■□□□□ 0.83
PDS5AQ29RF7 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC20.26■□□□□ 0.83
PDS5AQ29RF7 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC20.26■□□□□ 0.83
PDS5AQ29RF7 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC20.26■□□□□ 0.83
PDS5AQ29RF7 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC20.26■□□□□ 0.83
PDS5AQ29RF7 AL139011.1-202ENST00000642063 584 ntBASIC20.26■□□□□ 0.83
PDS5AQ29RF7 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDS5AQ29RF7 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC20.25■□□□□ 0.83
PDS5AQ29RF7 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDS5AQ29RF7 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDS5AQ29RF7 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
PDS5AQ29RF7 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
PDS5AQ29RF7 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PDS5AQ29RF7 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PDS5AQ29RF7 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PDS5AQ29RF7 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PDS5AQ29RF7 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PDS5AQ29RF7 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PDS5AQ29RF7 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
PDS5AQ29RF7 CD99-202ENST00000381180 530 ntTSL 2 BASIC20.25■□□□□ 0.83
PDS5AQ29RF7 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PDS5AQ29RF7 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC20.25■□□□□ 0.83
PDS5AQ29RF7 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PDS5AQ29RF7 WDR53-204ENST00000433160 887 ntTSL 5 BASIC20.25■□□□□ 0.83
PDS5AQ29RF7 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PDS5AQ29RF7 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDS5AQ29RF7 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PDS5AQ29RF7 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC20.25■□□□□ 0.83
PDS5AQ29RF7 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC20.25■□□□□ 0.83
PDS5AQ29RF7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PDS5AQ29RF7 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PDS5AQ29RF7 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDS5AQ29RF7 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDS5AQ29RF7 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC20.24■□□□□ 0.83
PDS5AQ29RF7 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDS5AQ29RF7 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
PDS5AQ29RF7 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC20.24■□□□□ 0.83
PDS5AQ29RF7 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PDS5AQ29RF7 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
PDS5AQ29RF7 AC141586.5-201ENST00000624546 2050 ntBASIC20.24■□□□□ 0.83
PDS5AQ29RF7 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PDS5AQ29RF7 SNX33P1-201ENST00000592116 1762 ntBASIC20.24■□□□□ 0.83
PDS5AQ29RF7 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PDS5AQ29RF7 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDS5AQ29RF7 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.24■□□□□ 0.83
PDS5AQ29RF7 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDS5AQ29RF7 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDS5AQ29RF7 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDS5AQ29RF7 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
PDS5AQ29RF7 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC20.24■□□□□ 0.83
PDS5AQ29RF7 RPL30-202ENST00000396070 440 ntTSL 2 BASIC20.24■□□□□ 0.83
PDS5AQ29RF7 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC20.24■□□□□ 0.83
PDS5AQ29RF7 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC20.24■□□□□ 0.83
PDS5AQ29RF7 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC20.24■□□□□ 0.83
PDS5AQ29RF7 SLBP-205ENST00000488267 987 ntTSL 2 BASIC20.24■□□□□ 0.83
PDS5AQ29RF7 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC20.24■□□□□ 0.83
PDS5AQ29RF7 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC20.24■□□□□ 0.83
PDS5AQ29RF7 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC20.24■□□□□ 0.83
PDS5AQ29RF7 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC20.24■□□□□ 0.83
PDS5AQ29RF7 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC20.24■□□□□ 0.83
PDS5AQ29RF7 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDS5AQ29RF7 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDS5AQ29RF7 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC20.24■□□□□ 0.83
PDS5AQ29RF7 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
PDS5AQ29RF7 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
PDS5AQ29RF7 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC20.23■□□□□ 0.83
PDS5AQ29RF7 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PDS5AQ29RF7 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
PDS5AQ29RF7 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
PDS5AQ29RF7 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
PDS5AQ29RF7 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDS5AQ29RF7 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC20.23■□□□□ 0.83
PDS5AQ29RF7 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDS5AQ29RF7 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC20.23■□□□□ 0.83
PDS5AQ29RF7 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDS5AQ29RF7 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDS5AQ29RF7 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PDS5AQ29RF7 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PDS5AQ29RF7 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDS5AQ29RF7 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDS5AQ29RF7 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.23■□□□□ 0.83
PDS5AQ29RF7 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PDS5AQ29RF7 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PDS5AQ29RF7 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PDS5AQ29RF7 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC20.23■□□□□ 0.83
PDS5AQ29RF7 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
PDS5AQ29RF7 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC20.23■□□□□ 0.83
PDS5AQ29RF7 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC20.23■□□□□ 0.83
PDS5AQ29RF7 AP002490.2-201ENST00000524791 560 ntBASIC20.23■□□□□ 0.83
PDS5AQ29RF7 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC20.23■□□□□ 0.83
PDS5AQ29RF7 AC004449.1-201ENST00000564240 433 ntBASIC20.23■□□□□ 0.83
PDS5AQ29RF7 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC20.23■□□□□ 0.83
PDS5AQ29RF7 AP000842.3-202ENST00000569238 1080 ntBASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms