Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.8■□□□□ 0.76
IRX3P78415 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.8■□□□□ 0.76
IRX3P78415 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
IRX3P78415 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
IRX3P78415 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
IRX3P78415 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
IRX3P78415 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.8■□□□□ 0.76
IRX3P78415 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
IRX3P78415 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
IRX3P78415 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.8■□□□□ 0.76
IRX3P78415 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.8■□□□□ 0.76
IRX3P78415 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.8■□□□□ 0.76
IRX3P78415 AC067863.1-201ENST00000494933 530 ntBASIC19.8■□□□□ 0.76
IRX3P78415 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
IRX3P78415 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.8■□□□□ 0.76
IRX3P78415 GREM1-201ENST00000560677 623 ntTSL 4 BASIC19.8■□□□□ 0.76
IRX3P78415 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.8■□□□□ 0.76
IRX3P78415 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
IRX3P78415 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
IRX3P78415 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
IRX3P78415 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.8■□□□□ 0.76
IRX3P78415 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
IRX3P78415 AC138028.4-201ENST00000564984 1845 ntBASIC19.8■□□□□ 0.76
IRX3P78415 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.8■□□□□ 0.76
IRX3P78415 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.8■□□□□ 0.76
IRX3P78415 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
IRX3P78415 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
IRX3P78415 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
IRX3P78415 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
IRX3P78415 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.8■□□□□ 0.76
IRX3P78415 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
IRX3P78415 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
IRX3P78415 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
IRX3P78415 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
IRX3P78415 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
IRX3P78415 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
IRX3P78415 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
IRX3P78415 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.79■□□□□ 0.76
IRX3P78415 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
IRX3P78415 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
IRX3P78415 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
IRX3P78415 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
IRX3P78415 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
IRX3P78415 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
IRX3P78415 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
IRX3P78415 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
IRX3P78415 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
IRX3P78415 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
IRX3P78415 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
IRX3P78415 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
IRX3P78415 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
IRX3P78415 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19.79■□□□□ 0.76
IRX3P78415 AL592309.1-201ENST00000443127 649 ntBASIC19.79■□□□□ 0.76
IRX3P78415 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
IRX3P78415 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
IRX3P78415 RN7SL589P-201ENST00000481268 310 ntBASIC19.79■□□□□ 0.76
IRX3P78415 AC107918.2-201ENST00000530817 355 ntBASIC19.79■□□□□ 0.76
IRX3P78415 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.79■□□□□ 0.76
IRX3P78415 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.79■□□□□ 0.76
IRX3P78415 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.79■□□□□ 0.76
IRX3P78415 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
IRX3P78415 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.79■□□□□ 0.76
IRX3P78415 LINC01451-201ENST00000623792 534 ntBASIC19.79■□□□□ 0.76
IRX3P78415 Z92544.3-201ENST00000624747 417 ntBASIC19.79■□□□□ 0.76
IRX3P78415 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.79■□□□□ 0.76
IRX3P78415 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
IRX3P78415 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
IRX3P78415 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
IRX3P78415 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.79■□□□□ 0.76
IRX3P78415 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.79■□□□□ 0.76
IRX3P78415 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.79■□□□□ 0.76
IRX3P78415 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.79■□□□□ 0.76
IRX3P78415 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.79■□□□□ 0.76
IRX3P78415 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.79■□□□□ 0.76
IRX3P78415 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.79■□□□□ 0.76
IRX3P78415 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.79■□□□□ 0.76
IRX3P78415 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.79■□□□□ 0.76
IRX3P78415 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
IRX3P78415 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
IRX3P78415 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
IRX3P78415 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
IRX3P78415 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.78■□□□□ 0.76
IRX3P78415 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
IRX3P78415 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
IRX3P78415 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
IRX3P78415 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
IRX3P78415 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
IRX3P78415 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.78■□□□□ 0.76
IRX3P78415 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
IRX3P78415 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
IRX3P78415 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
IRX3P78415 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.78■□□□□ 0.76
IRX3P78415 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
IRX3P78415 COX20P2-201ENST00000452636 358 ntBASIC19.78■□□□□ 0.76
IRX3P78415 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.78■□□□□ 0.76
IRX3P78415 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.78■□□□□ 0.76
IRX3P78415 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19.78■□□□□ 0.76
IRX3P78415 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.78■□□□□ 0.76
IRX3P78415 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.78■□□□□ 0.76
IRX3P78415 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms