Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.61■□□□□ 0.25
YBX1P67809 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.61■□□□□ 0.25
YBX1P67809 AC008735.5-201ENST00000623544 497 ntBASIC16.61■□□□□ 0.25
YBX1P67809 AC116407.3-201ENST00000623905 1129 ntBASIC16.61■□□□□ 0.25
YBX1P67809 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.61■□□□□ 0.25
YBX1P67809 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
YBX1P67809 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
YBX1P67809 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
YBX1P67809 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.61■□□□□ 0.25
YBX1P67809 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
YBX1P67809 AL590787.1-201ENST00000568856 1315 ntBASIC16.61■□□□□ 0.25
YBX1P67809 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
YBX1P67809 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.61■□□□□ 0.25
YBX1P67809 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
YBX1P67809 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
YBX1P67809 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
YBX1P67809 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
YBX1P67809 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
YBX1P67809 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.61■□□□□ 0.25
YBX1P67809 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
YBX1P67809 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
YBX1P67809 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
YBX1P67809 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.6■□□□□ 0.25
YBX1P67809 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
YBX1P67809 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
YBX1P67809 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
YBX1P67809 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.6■□□□□ 0.25
YBX1P67809 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
YBX1P67809 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
YBX1P67809 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
YBX1P67809 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
YBX1P67809 AL603756.1-201ENST00000606511 2163 ntBASIC16.6■□□□□ 0.25
YBX1P67809 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
YBX1P67809 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
YBX1P67809 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
YBX1P67809 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
YBX1P67809 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
YBX1P67809 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
YBX1P67809 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
YBX1P67809 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.6■□□□□ 0.25
YBX1P67809 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
YBX1P67809 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.6■□□□□ 0.25
YBX1P67809 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
YBX1P67809 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.6■□□□□ 0.25
YBX1P67809 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.6■□□□□ 0.25
YBX1P67809 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.6■□□□□ 0.25
YBX1P67809 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.6■□□□□ 0.25
YBX1P67809 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.6■□□□□ 0.25
YBX1P67809 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
YBX1P67809 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.6■□□□□ 0.25
YBX1P67809 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.6■□□□□ 0.25
YBX1P67809 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.6■□□□□ 0.25
YBX1P67809 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.6■□□□□ 0.25
YBX1P67809 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.6■□□□□ 0.25
YBX1P67809 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
YBX1P67809 AL139424.1-201ENST00000607572 797 ntBASIC16.6■□□□□ 0.25
YBX1P67809 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
YBX1P67809 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.6■□□□□ 0.25
YBX1P67809 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
YBX1P67809 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
YBX1P67809 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
YBX1P67809 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
YBX1P67809 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
YBX1P67809 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
YBX1P67809 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
YBX1P67809 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
YBX1P67809 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
YBX1P67809 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
YBX1P67809 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
YBX1P67809 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
YBX1P67809 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
YBX1P67809 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
YBX1P67809 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
YBX1P67809 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
YBX1P67809 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
YBX1P67809 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
YBX1P67809 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
YBX1P67809 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.59■□□□□ 0.25
YBX1P67809 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
YBX1P67809 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.59■□□□□ 0.25
YBX1P67809 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
YBX1P67809 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
YBX1P67809 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.59■□□□□ 0.25
YBX1P67809 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
YBX1P67809 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
YBX1P67809 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.59■□□□□ 0.25
YBX1P67809 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.59■□□□□ 0.25
YBX1P67809 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.59■□□□□ 0.25
YBX1P67809 AC092910.1-201ENST00000482027 1129 ntBASIC16.59■□□□□ 0.25
YBX1P67809 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.59■□□□□ 0.25
YBX1P67809 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
YBX1P67809 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
YBX1P67809 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.59■□□□□ 0.25
YBX1P67809 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.59■□□□□ 0.25
YBX1P67809 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.59■□□□□ 0.25
YBX1P67809 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
YBX1P67809 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.59■□□□□ 0.25
YBX1P67809 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
YBX1P67809 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
YBX1P67809 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms