Protein–RNA interactions for Protein: P55822

SH3BGR, SH3 domain-binding glutamic acid-rich protein, humanhuman

Predicted RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BGRP55822 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.33■□□□□ 0.21
SH3BGRP55822 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SH3BGRP55822 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SH3BGRP55822 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.33■□□□□ 0.2
SH3BGRP55822 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
SH3BGRP55822 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.33■□□□□ 0.2
SH3BGRP55822 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SH3BGRP55822 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SH3BGRP55822 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SH3BGRP55822 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SH3BGRP55822 AC034232.1-201ENST00000506026 1064 ntBASIC16.33■□□□□ 0.2
SH3BGRP55822 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SH3BGRP55822 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.33■□□□□ 0.2
SH3BGRP55822 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.33■□□□□ 0.2
SH3BGRP55822 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.33■□□□□ 0.2
SH3BGRP55822 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SH3BGRP55822 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SH3BGRP55822 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SH3BGRP55822 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SH3BGRP55822 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SH3BGRP55822 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SH3BGRP55822 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SH3BGRP55822 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SH3BGRP55822 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.33■□□□□ 0.2
SH3BGRP55822 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SH3BGRP55822 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SH3BGRP55822 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
SH3BGRP55822 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
SH3BGRP55822 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SH3BGRP55822 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.33■□□□□ 0.2
SH3BGRP55822 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.2
SH3BGRP55822 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
SH3BGRP55822 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SH3BGRP55822 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SH3BGRP55822 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SH3BGRP55822 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
SH3BGRP55822 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SH3BGRP55822 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SH3BGRP55822 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SH3BGRP55822 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SH3BGRP55822 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SH3BGRP55822 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
SH3BGRP55822 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SH3BGRP55822 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.32■□□□□ 0.2
SH3BGRP55822 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SH3BGRP55822 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SH3BGRP55822 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SH3BGRP55822 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.32■□□□□ 0.2
SH3BGRP55822 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
SH3BGRP55822 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.32■□□□□ 0.2
SH3BGRP55822 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.32■□□□□ 0.2
SH3BGRP55822 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.32■□□□□ 0.2
SH3BGRP55822 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.32■□□□□ 0.2
SH3BGRP55822 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.32■□□□□ 0.2
SH3BGRP55822 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.32■□□□□ 0.2
SH3BGRP55822 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SH3BGRP55822 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.32■□□□□ 0.2
SH3BGRP55822 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.32■□□□□ 0.2
SH3BGRP55822 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.32■□□□□ 0.2
SH3BGRP55822 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.32■□□□□ 0.2
SH3BGRP55822 LINC01238-205ENST00000567549 1107 ntBASIC16.32■□□□□ 0.2
SH3BGRP55822 RN7SL850P-201ENST00000579959 291 ntBASIC16.32■□□□□ 0.2
SH3BGRP55822 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.32■□□□□ 0.2
SH3BGRP55822 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
SH3BGRP55822 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.32■□□□□ 0.2
SH3BGRP55822 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.32■□□□□ 0.2
SH3BGRP55822 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SH3BGRP55822 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.32■□□□□ 0.2
SH3BGRP55822 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.32■□□□□ 0.2
SH3BGRP55822 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.32■□□□□ 0.2
SH3BGRP55822 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.32■□□□□ 0.2
SH3BGRP55822 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SH3BGRP55822 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SH3BGRP55822 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SH3BGRP55822 PAUPAR-201ENST00000630360 2965 ntBASIC16.32■□□□□ 0.2
SH3BGRP55822 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SH3BGRP55822 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
SH3BGRP55822 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SH3BGRP55822 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SH3BGRP55822 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SH3BGRP55822 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SH3BGRP55822 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC16.31■□□□□ 0.2
SH3BGRP55822 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SH3BGRP55822 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SH3BGRP55822 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SH3BGRP55822 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.31■□□□□ 0.2
SH3BGRP55822 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SH3BGRP55822 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SH3BGRP55822 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SH3BGRP55822 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.31■□□□□ 0.2
SH3BGRP55822 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.31■□□□□ 0.2
SH3BGRP55822 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SH3BGRP55822 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.31■□□□□ 0.2
SH3BGRP55822 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.31■□□□□ 0.2
SH3BGRP55822 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SH3BGRP55822 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SH3BGRP55822 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SH3BGRP55822 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.31■□□□□ 0.2
SH3BGRP55822 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.31■□□□□ 0.2
SH3BGRP55822 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms