Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SLC1A1P43005 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC1A1P43005 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.82■□□□□ 0.44
SLC1A1P43005 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC1A1P43005 AC243591.1-201ENST00000452967 1364 ntBASIC17.82■□□□□ 0.44
SLC1A1P43005 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.82■□□□□ 0.44
SLC1A1P43005 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC1A1P43005 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.82■□□□□ 0.44
SLC1A1P43005 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC1A1P43005 RBM17P3-201ENST00000417687 1192 ntBASIC17.82■□□□□ 0.44
SLC1A1P43005 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.82■□□□□ 0.44
SLC1A1P43005 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SLC1A1P43005 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.82■□□□□ 0.44
SLC1A1P43005 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.82■□□□□ 0.44
SLC1A1P43005 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.82■□□□□ 0.44
SLC1A1P43005 AC138894.3-201ENST00000603787 634 ntBASIC17.82■□□□□ 0.44
SLC1A1P43005 AL139288.1-201ENST00000623748 933 ntBASIC17.82■□□□□ 0.44
SLC1A1P43005 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.82■□□□□ 0.44
SLC1A1P43005 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.82■□□□□ 0.44
SLC1A1P43005 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC1A1P43005 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC1A1P43005 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
SLC1A1P43005 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.82■□□□□ 0.44
SLC1A1P43005 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC1A1P43005 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.82■□□□□ 0.44
SLC1A1P43005 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.82■□□□□ 0.44
SLC1A1P43005 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.82■□□□□ 0.44
SLC1A1P43005 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.82■□□□□ 0.44
SLC1A1P43005 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC1A1P43005 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.81■□□□□ 0.44
SLC1A1P43005 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC1A1P43005 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC1A1P43005 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC1A1P43005 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC1A1P43005 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC1A1P43005 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC1A1P43005 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC1A1P43005 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC1A1P43005 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC1A1P43005 BX005266.1-201ENST00000473402 457 ntBASIC17.81■□□□□ 0.44
SLC1A1P43005 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.81■□□□□ 0.44
SLC1A1P43005 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.81■□□□□ 0.44
SLC1A1P43005 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC1A1P43005 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.81■□□□□ 0.44
SLC1A1P43005 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.81■□□□□ 0.44
SLC1A1P43005 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC1A1P43005 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC1A1P43005 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SLC1A1P43005 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC1A1P43005 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC1A1P43005 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC1A1P43005 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SLC1A1P43005 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC1A1P43005 AC006449.5-201ENST00000610658 2098 ntBASIC17.81■□□□□ 0.44
SLC1A1P43005 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
SLC1A1P43005 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC1A1P43005 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC1A1P43005 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SLC1A1P43005 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC1A1P43005 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SLC1A1P43005 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC1A1P43005 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC1A1P43005 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SLC1A1P43005 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC1A1P43005 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SLC1A1P43005 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SLC1A1P43005 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC1A1P43005 AC006538.1-201ENST00000567905 1585 ntBASIC17.8■□□□□ 0.44
SLC1A1P43005 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC1A1P43005 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.8■□□□□ 0.44
SLC1A1P43005 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SLC1A1P43005 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SLC1A1P43005 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC1A1P43005 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC1A1P43005 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SLC1A1P43005 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.8■□□□□ 0.44
SLC1A1P43005 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.8■□□□□ 0.44
SLC1A1P43005 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.8■□□□□ 0.44
SLC1A1P43005 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SLC1A1P43005 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.8■□□□□ 0.44
SLC1A1P43005 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
SLC1A1P43005 AC013467.2-201ENST00000605472 835 ntBASIC17.8■□□□□ 0.44
SLC1A1P43005 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.8■□□□□ 0.44
SLC1A1P43005 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SLC1A1P43005 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.8■□□□□ 0.44
SLC1A1P43005 AL139011.1-202ENST00000642063 584 ntBASIC17.8■□□□□ 0.44
SLC1A1P43005 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SLC1A1P43005 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SLC1A1P43005 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.8■□□□□ 0.44
SLC1A1P43005 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SLC1A1P43005 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC1A1P43005 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
SLC1A1P43005 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SLC1A1P43005 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.8■□□□□ 0.44
SLC1A1P43005 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.8■□□□□ 0.44
SLC1A1P43005 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SLC1A1P43005 DOC2GP-204ENST00000639052 2548 ntBASIC17.79■□□□□ 0.44
SLC1A1P43005 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC1A1P43005 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLC1A1P43005 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms