Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CXCL5P42830 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
CXCL5P42830 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC11.55□□□□□ -0.56
CXCL5P42830 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CXCL5P42830 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CXCL5P42830 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CXCL5P42830 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CXCL5P42830 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CXCL5P42830 AL353692.3-201ENST00000407031 1396 ntBASIC11.54□□□□□ -0.56
CXCL5P42830 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC11.54□□□□□ -0.56
CXCL5P42830 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CXCL5P42830 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC11.54□□□□□ -0.56
CXCL5P42830 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CXCL5P42830 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
CXCL5P42830 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CXCL5P42830 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CXCL5P42830 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CXCL5P42830 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CXCL5P42830 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC11.54□□□□□ -0.56
CXCL5P42830 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CXCL5P42830 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC11.54□□□□□ -0.56
CXCL5P42830 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
CXCL5P42830 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CXCL5P42830 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CXCL5P42830 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CXCL5P42830 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CXCL5P42830 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
CXCL5P42830 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CXCL5P42830 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CXCL5P42830 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CXCL5P42830 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CXCL5P42830 AL662844.4-201ENST00000606367 2838 ntBASIC11.54□□□□□ -0.56
CXCL5P42830 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC11.54□□□□□ -0.56
CXCL5P42830 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CXCL5P42830 ANKRD20A18P-201ENST00000359341 492 ntBASIC11.54□□□□□ -0.56
CXCL5P42830 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CXCL5P42830 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC11.54□□□□□ -0.56
CXCL5P42830 HLA-F-220ENST00000434407 884 ntBASIC11.54□□□□□ -0.56
CXCL5P42830 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC11.54□□□□□ -0.56
CXCL5P42830 ZNF444P1-201ENST00000559497 298 ntBASIC11.54□□□□□ -0.56
CXCL5P42830 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
CXCL5P42830 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC11.54□□□□□ -0.56
CXCL5P42830 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC11.54□□□□□ -0.56
CXCL5P42830 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
CXCL5P42830 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CXCL5P42830 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CXCL5P42830 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CXCL5P42830 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CXCL5P42830 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CXCL5P42830 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
CXCL5P42830 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
CXCL5P42830 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC11.54□□□□□ -0.56
CXCL5P42830 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CXCL5P42830 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CXCL5P42830 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
CXCL5P42830 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CXCL5P42830 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
CXCL5P42830 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CXCL5P42830 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CXCL5P42830 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CXCL5P42830 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CXCL5P42830 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
CXCL5P42830 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CXCL5P42830 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
CXCL5P42830 EGFEM1P-202ENST00000431685 1563 ntBASIC11.54□□□□□ -0.56
CXCL5P42830 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CXCL5P42830 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC11.54□□□□□ -0.56
CXCL5P42830 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CXCL5P42830 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC11.53□□□□□ -0.56
CXCL5P42830 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
CXCL5P42830 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CXCL5P42830 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
CXCL5P42830 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CXCL5P42830 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC11.53□□□□□ -0.56
CXCL5P42830 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
CXCL5P42830 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
CXCL5P42830 KRT8P9-201ENST00000558927 1449 ntBASIC11.53□□□□□ -0.56
CXCL5P42830 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
CXCL5P42830 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CXCL5P42830 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CXCL5P42830 CYP2D8P-201ENST00000433633 1490 ntBASIC11.53□□□□□ -0.56
CXCL5P42830 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CXCL5P42830 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CXCL5P42830 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CXCL5P42830 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CXCL5P42830 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC11.53□□□□□ -0.56
CXCL5P42830 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CXCL5P42830 SNORA78-201ENST00000459373 127 ntBASIC11.53□□□□□ -0.56
CXCL5P42830 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC11.53□□□□□ -0.56
CXCL5P42830 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
CXCL5P42830 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC11.53□□□□□ -0.56
CXCL5P42830 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC11.53□□□□□ -0.56
CXCL5P42830 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC11.53□□□□□ -0.56
CXCL5P42830 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC11.53□□□□□ -0.56
CXCL5P42830 GPR32P1-201ENST00000601788 811 ntBASIC11.53□□□□□ -0.56
CXCL5P42830 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
CXCL5P42830 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
CXCL5P42830 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC11.53□□□□□ -0.56
CXCL5P42830 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
CXCL5P42830 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms