Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCNFP41002 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCNFP41002 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCNFP41002 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.16■□□□□ 0.34
CCNFP41002 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCNFP41002 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.16■□□□□ 0.34
CCNFP41002 KRT8P10-201ENST00000450021 1447 ntBASIC17.16■□□□□ 0.34
CCNFP41002 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCNFP41002 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCNFP41002 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCNFP41002 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCNFP41002 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
CCNFP41002 NUS1P2-201ENST00000417358 873 ntBASIC17.16■□□□□ 0.34
CCNFP41002 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.16■□□□□ 0.34
CCNFP41002 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.16■□□□□ 0.34
CCNFP41002 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.16■□□□□ 0.34
CCNFP41002 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.16■□□□□ 0.34
CCNFP41002 PRELID1P1-202ENST00000567272 903 ntBASIC17.16■□□□□ 0.34
CCNFP41002 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.16■□□□□ 0.34
CCNFP41002 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CCNFP41002 AC138894.3-201ENST00000603787 634 ntBASIC17.16■□□□□ 0.34
CCNFP41002 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.16■□□□□ 0.34
CCNFP41002 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCNFP41002 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.16■□□□□ 0.34
CCNFP41002 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCNFP41002 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCNFP41002 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.16■□□□□ 0.34
CCNFP41002 AL135999.2-201ENST00000622438 1686 ntBASIC17.16■□□□□ 0.34
CCNFP41002 HLA-A-202ENST00000376806 1854 ntBASIC17.16■□□□□ 0.34
CCNFP41002 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCNFP41002 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CCNFP41002 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCNFP41002 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
CCNFP41002 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCNFP41002 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCNFP41002 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CCNFP41002 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.16■□□□□ 0.34
CCNFP41002 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNFP41002 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNFP41002 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNFP41002 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNFP41002 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNFP41002 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNFP41002 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCNFP41002 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CCNFP41002 PCDHB17P-201ENST00000539533 2393 ntBASIC17.15■□□□□ 0.34
CCNFP41002 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNFP41002 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.15■□□□□ 0.34
CCNFP41002 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCNFP41002 KRT18P56-201ENST00000507275 550 ntBASIC17.15■□□□□ 0.34
CCNFP41002 FOSL1P1-201ENST00000511041 816 ntBASIC17.15■□□□□ 0.34
CCNFP41002 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.15■□□□□ 0.34
CCNFP41002 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.15■□□□□ 0.34
CCNFP41002 MIR5100-201ENST00000579544 119 ntBASIC17.15■□□□□ 0.34
CCNFP41002 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCNFP41002 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.15■□□□□ 0.34
CCNFP41002 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.15■□□□□ 0.34
CCNFP41002 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNFP41002 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CCNFP41002 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNFP41002 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.15■□□□□ 0.34
CCNFP41002 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
CCNFP41002 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNFP41002 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CCNFP41002 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.15■□□□□ 0.34
CCNFP41002 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
CCNFP41002 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
CCNFP41002 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
CCNFP41002 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCNFP41002 LINC02199-201ENST00000506655 2702 ntBASIC17.14■□□□□ 0.33
CCNFP41002 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCNFP41002 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCNFP41002 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCNFP41002 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCNFP41002 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCNFP41002 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCNFP41002 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCNFP41002 AL353593.2-201ENST00000602529 1483 ntBASIC17.14■□□□□ 0.33
CCNFP41002 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCNFP41002 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCNFP41002 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.14■□□□□ 0.33
CCNFP41002 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.14■□□□□ 0.33
CCNFP41002 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCNFP41002 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCNFP41002 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCNFP41002 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CCNFP41002 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.14■□□□□ 0.33
CCNFP41002 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CCNFP41002 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.14■□□□□ 0.33
CCNFP41002 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.14■□□□□ 0.33
CCNFP41002 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.14■□□□□ 0.33
CCNFP41002 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCNFP41002 AL591684.3-201ENST00000605187 298 ntBASIC17.14■□□□□ 0.33
CCNFP41002 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCNFP41002 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCNFP41002 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.14■□□□□ 0.33
CCNFP41002 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.14■□□□□ 0.33
CCNFP41002 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CCNFP41002 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.14■□□□□ 0.33
CCNFP41002 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms