Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HOXA9P31269 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.62■□□□□ 0.41
HOXA9P31269 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXA9P31269 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXA9P31269 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.62■□□□□ 0.41
HOXA9P31269 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXA9P31269 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HOXA9P31269 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.61■□□□□ 0.41
HOXA9P31269 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.61■□□□□ 0.41
HOXA9P31269 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXA9P31269 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXA9P31269 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HOXA9P31269 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXA9P31269 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
HOXA9P31269 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXA9P31269 TREML5P-201ENST00000421694 576 ntBASIC17.61■□□□□ 0.41
HOXA9P31269 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.61■□□□□ 0.41
HOXA9P31269 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.61■□□□□ 0.41
HOXA9P31269 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.61■□□□□ 0.41
HOXA9P31269 TERF1P3-201ENST00000505638 1227 ntBASIC17.61■□□□□ 0.41
HOXA9P31269 AC069120.2-201ENST00000524091 540 ntBASIC17.61■□□□□ 0.41
HOXA9P31269 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.61■□□□□ 0.41
HOXA9P31269 AC021097.1-201ENST00000607902 574 ntBASIC17.61■□□□□ 0.41
HOXA9P31269 MIR6080-201ENST00000617359 66 ntBASIC17.61■□□□□ 0.41
HOXA9P31269 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.61■□□□□ 0.41
HOXA9P31269 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXA9P31269 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HOXA9P31269 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.61■□□□□ 0.41
HOXA9P31269 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HOXA9P31269 KRT8P49-201ENST00000604166 1432 ntBASIC17.61■□□□□ 0.41
HOXA9P31269 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXA9P31269 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
HOXA9P31269 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXA9P31269 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HOXA9P31269 AC016027.1-202ENST00000607927 1699 ntBASIC17.61■□□□□ 0.41
HOXA9P31269 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXA9P31269 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXA9P31269 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXA9P31269 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.61■□□□□ 0.41
HOXA9P31269 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HOXA9P31269 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
HOXA9P31269 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXA9P31269 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.6■□□□□ 0.41
HOXA9P31269 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXA9P31269 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXA9P31269 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXA9P31269 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.6■□□□□ 0.41
HOXA9P31269 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.6■□□□□ 0.41
HOXA9P31269 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.6■□□□□ 0.41
HOXA9P31269 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXA9P31269 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.6■□□□□ 0.41
HOXA9P31269 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.6■□□□□ 0.41
HOXA9P31269 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.6■□□□□ 0.41
HOXA9P31269 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.6■□□□□ 0.41
HOXA9P31269 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXA9P31269 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HOXA9P31269 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXA9P31269 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.59■□□□□ 0.41
HOXA9P31269 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HOXA9P31269 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HOXA9P31269 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HOXA9P31269 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
HOXA9P31269 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.59■□□□□ 0.41
HOXA9P31269 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.59■□□□□ 0.41
HOXA9P31269 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.59■□□□□ 0.41
HOXA9P31269 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.59■□□□□ 0.41
HOXA9P31269 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HOXA9P31269 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.59■□□□□ 0.41
HOXA9P31269 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HOXA9P31269 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
HOXA9P31269 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HOXA9P31269 AC116353.5-201ENST00000638148 1699 ntBASIC17.59■□□□□ 0.41
HOXA9P31269 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HOXA9P31269 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.59■□□□□ 0.41
HOXA9P31269 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HOXA9P31269 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HOXA9P31269 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.59■□□□□ 0.41
HOXA9P31269 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
HOXA9P31269 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HOXA9P31269 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.59■□□□□ 0.41
HOXA9P31269 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
HOXA9P31269 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.59■□□□□ 0.41
HOXA9P31269 AC002472.2-201ENST00000442739 958 ntBASIC17.59■□□□□ 0.41
HOXA9P31269 TSPY16P-201ENST00000449843 468 ntBASIC17.59■□□□□ 0.41
HOXA9P31269 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.59■□□□□ 0.41
HOXA9P31269 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.59■□□□□ 0.41
HOXA9P31269 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HOXA9P31269 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
HOXA9P31269 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.59■□□□□ 0.41
HOXA9P31269 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.59■□□□□ 0.41
HOXA9P31269 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.59■□□□□ 0.41
HOXA9P31269 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.59■□□□□ 0.41
HOXA9P31269 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.59■□□□□ 0.41
HOXA9P31269 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.59■□□□□ 0.41
HOXA9P31269 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HOXA9P31269 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HOXA9P31269 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HOXA9P31269 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.59■□□□□ 0.41
HOXA9P31269 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
HOXA9P31269 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms