Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COL8A2P25067 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
COL8A2P25067 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.38□□□□□ -0.11
COL8A2P25067 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL8A2P25067 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL8A2P25067 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL8A2P25067 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
COL8A2P25067 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC14.37□□□□□ -0.11
COL8A2P25067 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
COL8A2P25067 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
COL8A2P25067 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
COL8A2P25067 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
COL8A2P25067 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
COL8A2P25067 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.37□□□□□ -0.11
COL8A2P25067 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
COL8A2P25067 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL8A2P25067 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL8A2P25067 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
COL8A2P25067 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.37□□□□□ -0.11
COL8A2P25067 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL8A2P25067 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL8A2P25067 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL8A2P25067 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.37□□□□□ -0.11
COL8A2P25067 HTR5BP-201ENST00000430851 1154 ntBASIC14.37□□□□□ -0.11
COL8A2P25067 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
COL8A2P25067 AC092183.1-201ENST00000469884 875 ntBASIC14.37□□□□□ -0.11
COL8A2P25067 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
COL8A2P25067 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.37□□□□□ -0.11
COL8A2P25067 AL078644.1-201ENST00000609881 752 ntBASIC14.37□□□□□ -0.11
COL8A2P25067 ACTL9-202ENST00000612068 1252 ntBASIC14.37□□□□□ -0.11
COL8A2P25067 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC14.37□□□□□ -0.11
COL8A2P25067 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC14.37□□□□□ -0.11
COL8A2P25067 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
COL8A2P25067 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
COL8A2P25067 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
COL8A2P25067 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
COL8A2P25067 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL8A2P25067 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.37□□□□□ -0.11
COL8A2P25067 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL8A2P25067 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
COL8A2P25067 AC129492.6-201ENST00000611383 1305 ntBASIC14.37□□□□□ -0.11
COL8A2P25067 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL8A2P25067 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.37□□□□□ -0.11
COL8A2P25067 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
COL8A2P25067 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
COL8A2P25067 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
COL8A2P25067 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL8A2P25067 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL8A2P25067 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
COL8A2P25067 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL8A2P25067 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
COL8A2P25067 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL8A2P25067 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
COL8A2P25067 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL8A2P25067 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.36□□□□□ -0.11
COL8A2P25067 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
COL8A2P25067 AL138688.1-201ENST00000624851 1594 ntBASIC14.36□□□□□ -0.11
COL8A2P25067 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL8A2P25067 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL8A2P25067 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL8A2P25067 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.36□□□□□ -0.11
COL8A2P25067 AC004967.1-201ENST00000453589 447 ntBASIC14.36□□□□□ -0.11
COL8A2P25067 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.36□□□□□ -0.11
COL8A2P25067 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.36□□□□□ -0.11
COL8A2P25067 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.36□□□□□ -0.11
COL8A2P25067 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
COL8A2P25067 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.36□□□□□ -0.11
COL8A2P25067 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.36□□□□□ -0.11
COL8A2P25067 MIR4469-201ENST00000583919 79 ntBASIC14.36□□□□□ -0.11
COL8A2P25067 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL8A2P25067 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL8A2P25067 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
COL8A2P25067 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL8A2P25067 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.36□□□□□ -0.11
COL8A2P25067 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.36□□□□□ -0.11
COL8A2P25067 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
COL8A2P25067 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC14.36□□□□□ -0.11
COL8A2P25067 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.36□□□□□ -0.11
COL8A2P25067 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
COL8A2P25067 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL8A2P25067 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL8A2P25067 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL8A2P25067 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL8A2P25067 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
COL8A2P25067 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
COL8A2P25067 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
COL8A2P25067 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL8A2P25067 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
COL8A2P25067 AC093525.9-201ENST00000624961 1746 ntBASIC14.35□□□□□ -0.11
COL8A2P25067 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC14.35□□□□□ -0.11
COL8A2P25067 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL8A2P25067 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.35□□□□□ -0.11
COL8A2P25067 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
COL8A2P25067 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.35□□□□□ -0.11
COL8A2P25067 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL8A2P25067 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
COL8A2P25067 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL8A2P25067 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
COL8A2P25067 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL8A2P25067 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms