Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.18■□□□□ 0.34
XPAP23025 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.18■□□□□ 0.34
XPAP23025 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.18■□□□□ 0.34
XPAP23025 AC092865.5-201ENST00000545435 363 ntBASIC17.18■□□□□ 0.34
XPAP23025 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.18■□□□□ 0.34
XPAP23025 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.18■□□□□ 0.34
XPAP23025 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
XPAP23025 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.18■□□□□ 0.34
XPAP23025 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
XPAP23025 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.18■□□□□ 0.34
XPAP23025 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
XPAP23025 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
XPAP23025 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
XPAP23025 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
XPAP23025 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
XPAP23025 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.17■□□□□ 0.34
XPAP23025 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
XPAP23025 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
XPAP23025 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
XPAP23025 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
XPAP23025 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.17■□□□□ 0.34
XPAP23025 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.17■□□□□ 0.34
XPAP23025 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
XPAP23025 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
XPAP23025 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
XPAP23025 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
XPAP23025 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
XPAP23025 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.17■□□□□ 0.34
XPAP23025 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
XPAP23025 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.17■□□□□ 0.34
XPAP23025 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
XPAP23025 HCG4B-203ENST00000450128 991 ntBASIC17.17■□□□□ 0.34
XPAP23025 AC087163.2-201ENST00000457299 853 ntBASIC17.17■□□□□ 0.34
XPAP23025 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.17■□□□□ 0.34
XPAP23025 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
XPAP23025 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.17■□□□□ 0.34
XPAP23025 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.17■□□□□ 0.34
XPAP23025 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.17■□□□□ 0.34
XPAP23025 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.17■□□□□ 0.34
XPAP23025 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
XPAP23025 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.17■□□□□ 0.34
XPAP23025 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
XPAP23025 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
XPAP23025 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
XPAP23025 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
XPAP23025 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
XPAP23025 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
XPAP23025 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.16■□□□□ 0.34
XPAP23025 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
XPAP23025 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
XPAP23025 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
XPAP23025 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
XPAP23025 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
XPAP23025 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.16■□□□□ 0.34
XPAP23025 PAWRP1-201ENST00000451083 565 ntBASIC17.16■□□□□ 0.34
XPAP23025 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.16■□□□□ 0.34
XPAP23025 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.16■□□□□ 0.34
XPAP23025 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.16■□□□□ 0.34
XPAP23025 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.16■□□□□ 0.34
XPAP23025 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.16■□□□□ 0.34
XPAP23025 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
XPAP23025 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.16■□□□□ 0.34
XPAP23025 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
XPAP23025 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.16■□□□□ 0.34
XPAP23025 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
XPAP23025 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
XPAP23025 LETM1P2-201ENST00000597330 2178 ntBASIC17.16■□□□□ 0.34
XPAP23025 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
XPAP23025 PKD1P5-201ENST00000532415 10291 ntBASIC17.16■□□□□ 0.34
XPAP23025 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
XPAP23025 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.16■□□□□ 0.34
XPAP23025 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
XPAP23025 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
XPAP23025 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
XPAP23025 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
XPAP23025 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.15■□□□□ 0.34
XPAP23025 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
XPAP23025 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
XPAP23025 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
XPAP23025 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
XPAP23025 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
XPAP23025 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.15■□□□□ 0.34
XPAP23025 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
XPAP23025 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
XPAP23025 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
XPAP23025 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.15■□□□□ 0.34
XPAP23025 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
XPAP23025 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
XPAP23025 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.15■□□□□ 0.34
XPAP23025 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
XPAP23025 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
XPAP23025 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
XPAP23025 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.15■□□□□ 0.34
XPAP23025 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
XPAP23025 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.15■□□□□ 0.34
XPAP23025 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
XPAP23025 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.15■□□□□ 0.34
XPAP23025 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
XPAP23025 AC023274.1-201ENST00000418278 595 ntBASIC17.15■□□□□ 0.34
XPAP23025 BX842568.4-201ENST00000421222 227 ntBASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms