Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 AC027307.3-201ENST00000594262 1100 ntBASIC16.71■□□□□ 0.27
BCKDHBP21953 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.71■□□□□ 0.27
BCKDHBP21953 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
BCKDHBP21953 TOP3BP1-201ENST00000420768 1380 ntBASIC16.71■□□□□ 0.27
BCKDHBP21953 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
BCKDHBP21953 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BCKDHBP21953 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.71■□□□□ 0.27
BCKDHBP21953 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
BCKDHBP21953 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BCKDHBP21953 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
BCKDHBP21953 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
BCKDHBP21953 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.71■□□□□ 0.26
BCKDHBP21953 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
BCKDHBP21953 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
BCKDHBP21953 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BCKDHBP21953 ABALON-201ENST00000629058 1903 ntBASIC16.7■□□□□ 0.26
BCKDHBP21953 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
BCKDHBP21953 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.7■□□□□ 0.26
BCKDHBP21953 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BCKDHBP21953 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
BCKDHBP21953 AL355312.1-201ENST00000407115 2176 ntBASIC16.7■□□□□ 0.26
BCKDHBP21953 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
BCKDHBP21953 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BCKDHBP21953 OR8S1-201ENST00000310194 1080 ntBASIC16.7■□□□□ 0.26
BCKDHBP21953 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BCKDHBP21953 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.7■□□□□ 0.26
BCKDHBP21953 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
BCKDHBP21953 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.7■□□□□ 0.26
BCKDHBP21953 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.7■□□□□ 0.26
BCKDHBP21953 AC142381.1-201ENST00000426099 345 ntBASIC16.7■□□□□ 0.26
BCKDHBP21953 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.7■□□□□ 0.26
BCKDHBP21953 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.7■□□□□ 0.26
BCKDHBP21953 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
BCKDHBP21953 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
BCKDHBP21953 MIR3909-201ENST00000579518 119 ntBASIC16.7■□□□□ 0.26
BCKDHBP21953 AC003101.2-201ENST00000612557 442 ntBASIC16.7■□□□□ 0.26
BCKDHBP21953 AC009118.2-201ENST00000613275 655 ntBASIC16.7■□□□□ 0.26
BCKDHBP21953 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
BCKDHBP21953 AL358472.5-202ENST00000641448 1267 ntBASIC16.7■□□□□ 0.26
BCKDHBP21953 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
BCKDHBP21953 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BCKDHBP21953 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.7■□□□□ 0.26
BCKDHBP21953 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.7■□□□□ 0.26
BCKDHBP21953 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
BCKDHBP21953 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
BCKDHBP21953 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
BCKDHBP21953 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
BCKDHBP21953 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BCKDHBP21953 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BCKDHBP21953 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.69■□□□□ 0.26
BCKDHBP21953 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BCKDHBP21953 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BCKDHBP21953 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.69■□□□□ 0.26
BCKDHBP21953 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
BCKDHBP21953 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BCKDHBP21953 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BCKDHBP21953 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BCKDHBP21953 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.69■□□□□ 0.26
BCKDHBP21953 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BCKDHBP21953 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BCKDHBP21953 COX5BP8-201ENST00000416911 349 ntBASIC16.69■□□□□ 0.26
BCKDHBP21953 NME2P1-201ENST00000426182 414 ntBASIC16.69■□□□□ 0.26
BCKDHBP21953 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.69■□□□□ 0.26
BCKDHBP21953 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.69■□□□□ 0.26
BCKDHBP21953 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.69■□□□□ 0.26
BCKDHBP21953 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BCKDHBP21953 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.69■□□□□ 0.26
BCKDHBP21953 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.69■□□□□ 0.26
BCKDHBP21953 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BCKDHBP21953 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.69■□□□□ 0.26
BCKDHBP21953 CR383656.12-201ENST00000549567 513 ntBASIC16.69■□□□□ 0.26
BCKDHBP21953 RARRES2P9-201ENST00000565168 469 ntBASIC16.69■□□□□ 0.26
BCKDHBP21953 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.69■□□□□ 0.26
BCKDHBP21953 AC018529.1-201ENST00000613063 361 ntBASIC16.69■□□□□ 0.26
BCKDHBP21953 AL138828.2-201ENST00000615812 383 ntBASIC16.69■□□□□ 0.26
BCKDHBP21953 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BCKDHBP21953 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BCKDHBP21953 NEFHP1-201ENST00000412845 2629 ntBASIC16.69■□□□□ 0.26
BCKDHBP21953 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BCKDHBP21953 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.69■□□□□ 0.26
BCKDHBP21953 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.69■□□□□ 0.26
BCKDHBP21953 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.69■□□□□ 0.26
BCKDHBP21953 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
BCKDHBP21953 AC020763.4-201ENST00000623414 4170 ntBASIC16.69■□□□□ 0.26
BCKDHBP21953 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BCKDHBP21953 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
BCKDHBP21953 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BCKDHBP21953 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BCKDHBP21953 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
BCKDHBP21953 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BCKDHBP21953 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BCKDHBP21953 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
BCKDHBP21953 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
BCKDHBP21953 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
BCKDHBP21953 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
BCKDHBP21953 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
BCKDHBP21953 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
BCKDHBP21953 AC022144.1-201ENST00000602255 1580 ntBASIC16.68■□□□□ 0.26
BCKDHBP21953 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
BCKDHBP21953 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms