Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
COL6A2P12110 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.85■□□□□ 0.29
COL6A2P12110 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COL6A2P12110 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL6A2P12110 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.85■□□□□ 0.29
COL6A2P12110 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL6A2P12110 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL6A2P12110 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
COL6A2P12110 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COL6A2P12110 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COL6A2P12110 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.85■□□□□ 0.29
COL6A2P12110 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
COL6A2P12110 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COL6A2P12110 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
COL6A2P12110 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.85■□□□□ 0.29
COL6A2P12110 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL6A2P12110 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.84■□□□□ 0.29
COL6A2P12110 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL6A2P12110 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.84■□□□□ 0.29
COL6A2P12110 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL6A2P12110 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL6A2P12110 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL6A2P12110 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.84■□□□□ 0.29
COL6A2P12110 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL6A2P12110 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL6A2P12110 AP002383.4-201ENST00000442518 975 ntBASIC16.84■□□□□ 0.29
COL6A2P12110 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL6A2P12110 TOB2P1-201ENST00000469761 992 ntBASIC16.84■□□□□ 0.29
COL6A2P12110 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
COL6A2P12110 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.84■□□□□ 0.29
COL6A2P12110 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
COL6A2P12110 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.84■□□□□ 0.29
COL6A2P12110 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.84■□□□□ 0.29
COL6A2P12110 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL6A2P12110 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
COL6A2P12110 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL6A2P12110 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL6A2P12110 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.84■□□□□ 0.29
COL6A2P12110 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.84■□□□□ 0.29
COL6A2P12110 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL6A2P12110 AC097637.2-201ENST00000624096 1997 ntBASIC16.84■□□□□ 0.29
COL6A2P12110 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.84■□□□□ 0.29
COL6A2P12110 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL6A2P12110 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.84■□□□□ 0.29
COL6A2P12110 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
COL6A2P12110 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.29
COL6A2P12110 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.83■□□□□ 0.29
COL6A2P12110 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
COL6A2P12110 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
COL6A2P12110 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL6A2P12110 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL6A2P12110 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL6A2P12110 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL6A2P12110 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL6A2P12110 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL6A2P12110 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
COL6A2P12110 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.83■□□□□ 0.28
COL6A2P12110 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL6A2P12110 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.83■□□□□ 0.28
COL6A2P12110 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL6A2P12110 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.83■□□□□ 0.28
COL6A2P12110 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL6A2P12110 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
COL6A2P12110 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.83■□□□□ 0.28
COL6A2P12110 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.83■□□□□ 0.28
COL6A2P12110 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
COL6A2P12110 KRT18P21-201ENST00000515767 1272 ntBASIC16.83■□□□□ 0.28
COL6A2P12110 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
COL6A2P12110 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.83■□□□□ 0.28
COL6A2P12110 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.83■□□□□ 0.28
COL6A2P12110 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.83■□□□□ 0.28
COL6A2P12110 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
COL6A2P12110 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
COL6A2P12110 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL6A2P12110 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL6A2P12110 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL6A2P12110 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
COL6A2P12110 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COL6A2P12110 AL513523.2-202ENST00000427283 2040 ntBASIC16.82■□□□□ 0.28
COL6A2P12110 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.82■□□□□ 0.28
COL6A2P12110 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
COL6A2P12110 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COL6A2P12110 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COL6A2P12110 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
COL6A2P12110 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.82■□□□□ 0.28
COL6A2P12110 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COL6A2P12110 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COL6A2P12110 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
COL6A2P12110 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COL6A2P12110 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COL6A2P12110 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COL6A2P12110 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COL6A2P12110 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.82■□□□□ 0.28
COL6A2P12110 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
COL6A2P12110 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
COL6A2P12110 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COL6A2P12110 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
COL6A2P12110 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.82■□□□□ 0.28
COL6A2P12110 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COL6A2P12110 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms