Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
FAM228BP0C875 CICP6-201ENST00000457191 2729 ntBASIC18.17■□□□□ 0.5
FAM228BP0C875 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.17■□□□□ 0.5
FAM228BP0C875 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FAM228BP0C875 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FAM228BP0C875 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
FAM228BP0C875 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
FAM228BP0C875 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.17■□□□□ 0.5
FAM228BP0C875 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FAM228BP0C875 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FAM228BP0C875 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
FAM228BP0C875 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FAM228BP0C875 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.17■□□□□ 0.5
FAM228BP0C875 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.17■□□□□ 0.5
FAM228BP0C875 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.17■□□□□ 0.5
FAM228BP0C875 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.17■□□□□ 0.5
FAM228BP0C875 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
FAM228BP0C875 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
FAM228BP0C875 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
FAM228BP0C875 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
FAM228BP0C875 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC18.16■□□□□ 0.5
FAM228BP0C875 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FAM228BP0C875 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
FAM228BP0C875 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.16■□□□□ 0.5
FAM228BP0C875 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
FAM228BP0C875 NUS1P2-201ENST00000417358 873 ntBASIC18.16■□□□□ 0.5
FAM228BP0C875 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FAM228BP0C875 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
FAM228BP0C875 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
FAM228BP0C875 AC092119.3-201ENST00000612618 583 ntBASIC18.16■□□□□ 0.5
FAM228BP0C875 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
FAM228BP0C875 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
FAM228BP0C875 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.16■□□□□ 0.5
FAM228BP0C875 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
FAM228BP0C875 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
FAM228BP0C875 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FAM228BP0C875 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
FAM228BP0C875 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC18.16■□□□□ 0.5
FAM228BP0C875 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
FAM228BP0C875 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FAM228BP0C875 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.16■□□□□ 0.5
FAM228BP0C875 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FAM228BP0C875 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
FAM228BP0C875 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
FAM228BP0C875 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FAM228BP0C875 LINC00895-201ENST00000629028 1637 ntBASIC18.16■□□□□ 0.5
FAM228BP0C875 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FAM228BP0C875 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
FAM228BP0C875 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
FAM228BP0C875 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
FAM228BP0C875 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.15■□□□□ 0.5
FAM228BP0C875 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
FAM228BP0C875 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
FAM228BP0C875 AC008894.3-201ENST00000624324 3103 ntBASIC18.15■□□□□ 0.5
FAM228BP0C875 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC18.15■□□□□ 0.5
FAM228BP0C875 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FAM228BP0C875 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FAM228BP0C875 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
FAM228BP0C875 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
FAM228BP0C875 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FAM228BP0C875 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
FAM228BP0C875 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FAM228BP0C875 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.15■□□□□ 0.5
FAM228BP0C875 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.15■□□□□ 0.5
FAM228BP0C875 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.15■□□□□ 0.5
FAM228BP0C875 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FAM228BP0C875 AC069148.1-201ENST00000608741 768 ntBASIC18.15■□□□□ 0.5
FAM228BP0C875 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
FAM228BP0C875 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
FAM228BP0C875 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FAM228BP0C875 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
FAM228BP0C875 AL590787.1-201ENST00000568856 1315 ntBASIC18.15■□□□□ 0.5
FAM228BP0C875 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
FAM228BP0C875 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
FAM228BP0C875 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.15■□□□□ 0.5
FAM228BP0C875 AC046158.3-201ENST00000624947 2558 ntBASIC18.15■□□□□ 0.5
FAM228BP0C875 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
FAM228BP0C875 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.15■□□□□ 0.5
FAM228BP0C875 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
FAM228BP0C875 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
FAM228BP0C875 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FAM228BP0C875 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.15■□□□□ 0.5
FAM228BP0C875 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
FAM228BP0C875 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
FAM228BP0C875 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.15■□□□□ 0.5
FAM228BP0C875 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
FAM228BP0C875 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.15■□□□□ 0.5
FAM228BP0C875 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
FAM228BP0C875 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
FAM228BP0C875 PCDHA1-201ENST00000378133 2726 ntBASIC18.14■□□□□ 0.5
FAM228BP0C875 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.5
FAM228BP0C875 AGK-211ENST00000629555 2765 ntTSL 5 BASIC18.14■□□□□ 0.5
FAM228BP0C875 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.14■□□□□ 0.5
FAM228BP0C875 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
FAM228BP0C875 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
FAM228BP0C875 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
FAM228BP0C875 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.14■□□□□ 0.49
FAM228BP0C875 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
FAM228BP0C875 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FAM228BP0C875 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms