Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.13■□□□□ 0.33
SRPRAP08240 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRPRAP08240 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.13■□□□□ 0.33
SRPRAP08240 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRPRAP08240 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRPRAP08240 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRPRAP08240 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SRPRAP08240 PMS2P2-201ENST00000425039 1128 ntBASIC17.13■□□□□ 0.33
SRPRAP08240 ADH5P3-201ENST00000433842 1137 ntBASIC17.13■□□□□ 0.33
SRPRAP08240 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.13■□□□□ 0.33
SRPRAP08240 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.13■□□□□ 0.33
SRPRAP08240 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.13■□□□□ 0.33
SRPRAP08240 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.13■□□□□ 0.33
SRPRAP08240 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.13■□□□□ 0.33
SRPRAP08240 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRPRAP08240 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SRPRAP08240 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.13■□□□□ 0.33
SRPRAP08240 MPDU1-223ENST00000582151 728 ntBASIC17.13■□□□□ 0.33
SRPRAP08240 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.13■□□□□ 0.33
SRPRAP08240 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.13■□□□□ 0.33
SRPRAP08240 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.13■□□□□ 0.33
SRPRAP08240 AC099522.2-201ENST00000607001 744 ntBASIC17.13■□□□□ 0.33
SRPRAP08240 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.13■□□□□ 0.33
SRPRAP08240 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.13■□□□□ 0.33
SRPRAP08240 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SRPRAP08240 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRPRAP08240 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SRPRAP08240 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.13■□□□□ 0.33
SRPRAP08240 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SRPRAP08240 SLC22A20-204ENST00000530038 1673 ntBASIC17.13■□□□□ 0.33
SRPRAP08240 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRPRAP08240 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRPRAP08240 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.13■□□□□ 0.33
SRPRAP08240 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SRPRAP08240 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRPRAP08240 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SRPRAP08240 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRPRAP08240 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRPRAP08240 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SRPRAP08240 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.12■□□□□ 0.33
SRPRAP08240 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SRPRAP08240 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRPRAP08240 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRPRAP08240 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SRPRAP08240 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRPRAP08240 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.12■□□□□ 0.33
SRPRAP08240 AL355306.1-201ENST00000415580 579 ntBASIC17.12■□□□□ 0.33
SRPRAP08240 AL671277.1-201ENST00000429656 993 ntBASIC17.12■□□□□ 0.33
SRPRAP08240 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.12■□□□□ 0.33
SRPRAP08240 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SRPRAP08240 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRPRAP08240 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SRPRAP08240 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
SRPRAP08240 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.12■□□□□ 0.33
SRPRAP08240 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.12■□□□□ 0.33
SRPRAP08240 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.12■□□□□ 0.33
SRPRAP08240 AC109635.5-201ENST00000533593 962 ntBASIC17.12■□□□□ 0.33
SRPRAP08240 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.12■□□□□ 0.33
SRPRAP08240 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.12■□□□□ 0.33
SRPRAP08240 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SRPRAP08240 AL009183.1-201ENST00000603760 355 ntBASIC17.12■□□□□ 0.33
SRPRAP08240 AC004835.2-201ENST00000603762 682 ntBASIC17.12■□□□□ 0.33
SRPRAP08240 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.12■□□□□ 0.33
SRPRAP08240 AC026120.1-201ENST00000611536 926 ntBASIC17.12■□□□□ 0.33
SRPRAP08240 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
SRPRAP08240 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRPRAP08240 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SRPRAP08240 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.12■□□□□ 0.33
SRPRAP08240 KRT18P28-201ENST00000453838 1332 ntBASIC17.12■□□□□ 0.33
SRPRAP08240 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRPRAP08240 AC131009.4-201ENST00000624048 1740 ntBASIC17.12■□□□□ 0.33
SRPRAP08240 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SRPRAP08240 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRPRAP08240 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.12■□□□□ 0.33
SRPRAP08240 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRPRAP08240 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRPRAP08240 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRPRAP08240 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRPRAP08240 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRPRAP08240 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.12■□□□□ 0.33
SRPRAP08240 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRPRAP08240 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.11■□□□□ 0.33
SRPRAP08240 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRPRAP08240 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
SRPRAP08240 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRPRAP08240 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRPRAP08240 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SRPRAP08240 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRPRAP08240 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRPRAP08240 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.11■□□□□ 0.33
SRPRAP08240 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.11■□□□□ 0.33
SRPRAP08240 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.11■□□□□ 0.33
SRPRAP08240 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SRPRAP08240 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRPRAP08240 MIR3909-201ENST00000579518 119 ntBASIC17.11■□□□□ 0.33
SRPRAP08240 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SRPRAP08240 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRPRAP08240 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRPRAP08240 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SRPRAP08240 TUBB8P12-201ENST00000308911 1335 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms